RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 DGKKQ5KSL6 1271 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CTSL3PQ5NE16 218 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 C6orf136Q5SQH8 315 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 C10orf62Q5T681 223 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CACHD1Q5VU97 1274 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 TTC23Q5W5X9 447 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CXorf57Q6NSI4 855 aaKnown RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 GTF2H2CQ6P1K8 395 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 FBXO42Q6P3S6 717 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 LAYNQ6UX15 382 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 RBM44Q6ZP01 1051 aaKnown RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 TAS2R42Q7RTR8 314 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 LRRC70Q7Z2Q7 622 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 GPR141Q7Z602 305 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 PEG10Q86TG7 708 aaKnown RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SYVN1Q86TM6 617 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ERI1Q8IV48 349 aaKnown RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 FAM217AQ8IXS0 508 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ELMOD1Q8N336 334 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SVOPLQ8N434 492 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CPXM2Q8N436 756 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 TTC30BQ8N4P2 665 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 DHRSXQ8N5I4 330 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 FAM156AQ8NDB6 213 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 OR9I1Q8NGQ6 314 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 METTL6Q8TCB7 284 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SLC13A3Q8WWT9 602 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 FGF13Q92913 245 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 VPS33AQ96AX1 596 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ELSPBP1Q96BH3 223 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 MOCOSQ96EN8 888 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 MAGED4Q96JG8 741 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 C3orf30Q96M34 536 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 NTMT1Q9BV86 223 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 EDEM2Q9BV94 578 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ARRDC1-AS1Q9H2J1 176 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ATP13A3Q9H7F0 1226 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 RMND5AQ9H871 391 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SLC52A3Q9NQ40 469 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CMTM6Q9NX76 183 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 PKD2L2Q9NZM6 624 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 PTGFRNQ9P2B2 879 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ATXN10Q9UBB4 475 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ZNF639Q9UID6 485 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ANGPTL3Q9Y5C1 460 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ENTPD2Q9Y5L3 495 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 PCSK5Q92824 1860 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 MYO18BQ8IUG5 2567 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 MYO18AQ92614 2054 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 PTPRDP23468 1912 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TRBV5-4A0A0C4DH59 114 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 GLYATL1P3A0A0U1RQE8 302 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 AGAP14A8MT82 685 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 K7EPI3 171 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CDC7O00311 574 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CCL22O00626 93 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 LSM1O15116 133 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 VILLO15195 856 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 UGDHO60701 494 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 NIPSNAP2O75323 286 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TIPRLO75663 272 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 RFPL2O75678 378 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 RSL1D1O76021 490 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 RECQL5O94762 991 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 VNN2O95498 520 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TRBC1P01850 177 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CAPN1P07384 714 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ANXA6P08133 673 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CHRM2P08172 466 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ANXA5P08758 320 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 HIST1H2AGP0C0S8 130 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 PRPS2P11908 318 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ATP6V1B1P15313 513 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 HMGA1P17096 107 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TSPAN8P19075 237 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 GGT1P19440 569 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 HIST1H2ADP20671 130 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 CD6P30203 668 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 RXRGP48443 463 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ALDH3A2P51648 485 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 PGGT1BP53609 377 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 DIO3P55073 304 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 FOXA1P55317 472 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 AP1S2P56377 157 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 SNRPD1P62314 119 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 RAB1AP62820 205 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 RPS24P62847 133 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 POLR2LP62875 67 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 PLOD1Q02809 727 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 LRRC74AQ0VAA2 488 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TWF1Q12792 350 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 TRAF2Q12933 501 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 NFATC2Q13469 925 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 DCTN2Q13561 401 aaKnown RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 GRB7Q14451 532 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 AP5B1Q2VPB7 878 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 LRRC23Q53EV4 343 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 MPPE1Q53F39 396 aa5.06□□□□□ -1.6
CAPN3-217ENST00000567817 SETMARQ53H47 684 aaPredicted RBP5.06□□□□□ -1.6
CAPN3-217ENST00000567817 ZNF362Q5T0B9 420 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms