RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 TREX1Q9NSU2 369 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 LAMP3Q9UQV4 416 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 CHCHD2Q9Y6H1 151 aaPredicted RBP12.55□□□□□ -0.4
SMG1-213ENST00000567737 MYOCOSA0A1B0GUC4 107 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 H0Y3Z8 333 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 J3QL48 77 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 HS3ST1O14792 307 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 TRIM3O75382 744 aaPredicted RBP12.54□□□□□ -0.4
SMG1-213ENST00000567737 POU2F1P14859 743 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 NPPBP16860 134 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 SAT1P21673 171 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 GCKP35557 465 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 UGT2B10P36537 528 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 ACVR1BP36896 505 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 CETN2P41208 172 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 HNRNPFP52597 415 aaKnown RBP12.54□□□□□ -0.4
SMG1-213ENST00000567737 BEX5Q5H9J7 111 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 TOR1AIP1Q5JTV8 583 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 UBAP2Q5T6F2 1119 aaKnown RBP12.54□□□□□ -0.4
SMG1-213ENST00000567737 MILR1Q7Z6M3 343 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 NUBPLQ8TB37 319 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 ART5Q96L15 291 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 TUBA1CQ9BQE3 449 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 NPLQ9BXD5 320 aaPredicted RBP12.54□□□□□ -0.4
SMG1-213ENST00000567737 ALOXE3Q9BYJ1 711 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 KLHL31Q9H511 634 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 ETNK1Q9HBU6 452 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 VTI1BQ9UEU0 232 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 CNOT11Q9UKZ1 510 aaKnown RBP12.54□□□□□ -0.4
SMG1-213ENST00000567737 IKBKGQ9Y6K9 419 aa12.54□□□□□ -0.4
SMG1-213ENST00000567737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMG1-213ENST00000567737 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.53□□□□□ -0.4
SMG1-213ENST00000567737 C16orf97H3BN30 126 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 GPRIN2O60269 458 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 ACTL6AO96019 429 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 PTMAP06454 111 aaKnown RBP12.53□□□□□ -0.4
SMG1-213ENST00000567737 SRD5A1P18405 259 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 CHMP24386 653 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 CFPP27918 469 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 SERPINB3P29508 390 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 CCKARP32238 428 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
SMG1-213ENST00000567737 FDFT1P37268 417 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 MASP1P48740 699 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 HADHBP55084 474 aaKnown RBP12.53□□□□□ -0.4
SMG1-213ENST00000567737 STX4Q12846 297 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 RUNX2Q13950 521 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 IQCB1Q15051 598 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 EIPR1Q53HC9 387 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 C12orf54Q6X4T0 127 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 CYHR1Q6ZMK1 362 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 MBOAT1Q6ZNC8 495 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 SH2D5Q6ZV89 423 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 OR8K1Q8NGG5 319 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 GIMAP7Q8NHV1 300 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 DIO2Q92813 273 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 GTPBP3Q969Y2 492 aaKnown RBP12.53□□□□□ -0.4
SMG1-213ENST00000567737 CCDC42Q96M95 316 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 SLC39A3Q9BRY0 314 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 SPNS1Q9H2V7 528 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 SLCO5A1Q9H2Y9 848 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 UBQLN3Q9H347 655 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 ZNHIT6Q9NWK9 470 aaKnown RBP12.53□□□□□ -0.4
SMG1-213ENST00000567737 ELOVL5Q9NYP7 299 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 KLHL42Q9P2K6 505 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 INTUQ9ULD6 942 aa12.53□□□□□ -0.4
SMG1-213ENST00000567737 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 A0A1W2PNV4 684 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 GOLGA6L9A6NEM1 432 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 C4orf51C9J302 202 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 GOLGA8KD6RF30 607 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 GOLGA8TH3BQL2 631 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 CTNSO60931 367 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 ADAM11O75078 769 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 TNFSF13O75888 250 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 VAPBO95292 243 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 PGRP06401 933 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 CPN1P15169 458 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 NMBRP28336 390 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 MSH2P43246 934 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 KCNJ5P48544 419 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 NAGLUP54802 743 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 CASP9P55211 416 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 STXBP1P61764 594 aaKnown RBP12.52□□□□□ -0.41
SMG1-213ENST00000567737 SRYQ05066 204 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 CSHL1Q14406 222 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 LAPTM4AQ15012 233 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 PLXDC2Q6UX71 529 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 CLEC17AQ6ZS10 378 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 PIWIL4Q7Z3Z4 852 aaKnown RBP12.52□□□□□ -0.41
SMG1-213ENST00000567737 ANKRD53Q8N9V6 530 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 ZNF721Q8TF20 911 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 CAVIN3Q969G5 261 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 SNF8Q96H20 258 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 GNRHR2Q96P88 292 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 UCN2Q96RP3 112 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 AMFRQ9UKV5 643 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 MAPRE3Q9UPY8 281 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 PDE10AQ9Y233 779 aa12.52□□□□□ -0.41
SMG1-213ENST00000567737 C15orf41Q9Y2V0 281 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms