RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 KIR3DL1P43629 444 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 PLTPP55058 493 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 KBTBD12Q3ZCT8 623 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 DEPDC1Q5TB30 811 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 SLC29A4Q7RTT9 530 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 FGD2Q7Z6J4 655 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 ISCA2Q86U28 154 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 GPR180Q86V85 440 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 CCDC25Q86WR0 208 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 OR52N2Q8NGI0 321 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 SMC6Q96SB8 1091 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 MAPKAP1Q9BPZ7 522 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 EXO5Q9H790 373 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 B4GALT7Q9UBV7 327 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 PHF3Q92576 2039 aaKnown RBP17.24■□□□□ 0.35
LINC01238-205ENST00000567549 IQANK1A0A1B0GTG1 560 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 OR6C76A6NM76 312 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 FAM166BA8MTA8 275 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 DYNC1I1O14576 645 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 RAD51CO43502 376 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 PRKNO60260 465 aaPredicted RBP17.23■□□□□ 0.35
LINC01238-205ENST00000567549 HCN1O60741 890 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 TBX6O95947 436 aaPredicted RBP17.23■□□□□ 0.35
LINC01238-205ENST00000567549 TGFB1P01137 390 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 IGHG3P01860 377 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 CTAGE8P0CG41 777 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 SLC35E2BP0CK96 405 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 GFAPP14136 432 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 GABRA1P14867 456 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 ACVR2AP27037 513 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 SERPINB3P29508 390 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 PHBP35232 272 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 PEX19P40855 299 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 MAGEA4P43358 317 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 MAN2A2P49641 1150 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 IGLV3-21P80748 117 aaPredicted RBP17.23■□□□□ 0.35
LINC01238-205ENST00000567549 SLAMF1Q13291 335 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 SLC10A1Q14973 349 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 HYAL4Q2M3T9 481 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 FBXO48Q5FWF7 155 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 C10orf62Q5T681 223 aaPredicted RBP17.23■□□□□ 0.35
LINC01238-205ENST00000567549 WLSQ5T9L3 541 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 C6orf163Q5TEZ5 329 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 SLC22A10Q63ZE4 541 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 CTAGE4Q8IX94 777 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 ST13P4Q8IZP2 240 aaPredicted RBP17.23■□□□□ 0.35
LINC01238-205ENST00000567549 ZNF295-AS1Q8N0V1 137 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 ZCCHC7Q8N3Z6 543 aaKnown RBP17.23■□□□□ 0.35
LINC01238-205ENST00000567549 LRRC46Q96FV0 321 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 ACTR8Q9H981 624 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 CNIH4Q9P003 139 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 DNAJC13O75165 2243 aa17.23■□□□□ 0.35
LINC01238-205ENST00000567549 TMEM200CA6NKL6 621 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 NPIPA2E9PIF3 369 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 NPIPA3F8WFD2 350 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 C19orf84I3L1E1 186 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 AQP7O14520 342 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 OR10H2O60403 315 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 PIAS1O75925 651 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 ALOX15P16050 662 aaPredicted RBP17.22■□□□□ 0.35
LINC01238-205ENST00000567549 ALDH18A1P54886 795 aaKnown RBP17.22■□□□□ 0.35
LINC01238-205ENST00000567549 TNFRSF17Q02223 184 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 DDX39BQ13838 428 aaKnown RBP17.22■□□□□ 0.35
LINC01238-205ENST00000567549 ACAP2Q15057 778 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 GXYLT1Q4G148 440 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 PIGGQ5H8A4 983 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 TBCELQ5QJ74 424 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 CES4AQ5XG92 561 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 CYP20A1Q6UW02 462 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 B3GNT6Q6ZMB0 384 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 ZNF793Q6ZN11 406 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 TEX9Q8N6V9 391 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 ACBD4Q8NC06 268 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 OR10Q1Q8NGQ4 319 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 SENP5Q96HI0 755 aaPredicted RBP17.22■□□□□ 0.35
LINC01238-205ENST00000567549 FBXL20Q96IG2 436 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 SCYL1Q96KG9 808 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 ATOH8Q96SQ7 321 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 TREX2Q9BQ50 279 aaPredicted RBP17.22■□□□□ 0.35
LINC01238-205ENST00000567549 DEPPQ9NTK1 212 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 QPCTLQ9NXS2 382 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 PSD3Q9NYI0 1048 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 ACAD8Q9UKU7 415 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 TMCO1Q9UM00 188 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 RNF6Q9Y252 685 aa17.22■□□□□ 0.35
LINC01238-205ENST00000567549 A0A1B0GVC2 190 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 UBXN8O00124 270 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 PRAMEF4O60810 478 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 GLSO94925 669 aaPredicted RBP17.21■□□□□ 0.35
LINC01238-205ENST00000567549 GALNSP34059 522 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 TMED10P49755 219 aaKnown RBP17.21■□□□□ 0.35
LINC01238-205ENST00000567549 RIPPLY3P57055 190 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 KCNJ2P63252 427 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 RPP38P78345 283 aaKnown RBP17.21■□□□□ 0.35
LINC01238-205ENST00000567549 PMPCAQ10713 525 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 SETDB1Q15047 1291 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 SF3B4Q15427 424 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC01238-205ENST00000567549 PRAMEF9Q5VWM5 478 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 ADNP2Q6IQ32 1131 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 ZNF572Q7Z3I7 529 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms