RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 CPSF6Q16630 551 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLK3-218ENST00000566926 GSTA3Q16772 222 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 TMEM35AQ53FP2 167 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 CRB2Q5IJ48 1285 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 PRAMEF9Q5VWM5 478 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 ISLR2Q6UXK2 745 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 QSOX2Q6ZRP7 698 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 CPSF7Q8N684 471 aaKnown RBP12.62□□□□□ -0.39
CLK3-218ENST00000566926 RBMXL3Q8N7X1 1067 aaKnown RBP12.62□□□□□ -0.39
CLK3-218ENST00000566926 TUBGCP3Q96CW5 907 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 KCNC2Q96PR1 638 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 OR52B2Q96RD2 323 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 KCNA7Q96RP8 456 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 SERINC2Q96SA4 455 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 NMUR2Q9GZQ4 415 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 TUBB1Q9H4B7 451 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 WDR55Q9H6Y2 383 aaPredicted RBP12.62□□□□□ -0.39
CLK3-218ENST00000566926 SLAMF7Q9NQ25 335 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 LANCL2Q9NS86 450 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 PPT2Q9UMR5 302 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 MRPS33Q9Y291 106 aaKnown RBP12.62□□□□□ -0.39
CLK3-218ENST00000566926 TIMM22Q9Y584 194 aa12.62□□□□□ -0.39
CLK3-218ENST00000566926 GCN1Q92616 2671 aaKnown RBP12.62□□□□□ -0.39
CLK3-218ENST00000566926 ERICH4A6NGS2 130 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 TTLL8A6PVC2 850 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 E9PBE3 544 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 MASP2O00187 686 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 FOXE1O00358 373 aaPredicted RBP12.61□□□□□ -0.39
CLK3-218ENST00000566926 CLDN4O14493 209 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 UBDO15205 165 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 PRMT3O60678 531 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 CDC123O75794 336 aaPredicted RBP12.61□□□□□ -0.39
CLK3-218ENST00000566926 RSL1D1O76021 490 aaKnown RBP12.61□□□□□ -0.39
CLK3-218ENST00000566926 WISP1O95388 367 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 B3GALT4O96024 378 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 JUNP05412 331 aaKnown RBP12.61□□□□□ -0.39
CLK3-218ENST00000566926 PCNAP12004 261 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 IDO1P14902 403 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 HNRNPH1P31943 449 aaKnown RBP12.61□□□□□ -0.39
CLK3-218ENST00000566926 PIK3CBP42338 1070 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 MRPL19P49406 292 aaKnown RBP12.61□□□□□ -0.39
CLK3-218ENST00000566926 PLA2G16P53816 162 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 MTTPP55157 894 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 STX1BP61266 288 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 ERVK-8P63133 956 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 OLR1P78380 273 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 RHAGQ02094 409 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 Q0VFX4 171 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 SQLEQ14534 574 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 ABRAXAS2Q15018 415 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 EXT1Q16394 746 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 IMPG1Q17R60 797 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 NADK2Q4G0N4 442 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 ABHD17CQ6PCB6 329 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 IGFL2Q6UWQ7 119 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 ANKRD37Q7Z713 158 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 CA13Q8N1Q1 262 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 EFCAB3Q8N7B9 438 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 C7orf57Q8NEG2 295 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 OR7G3Q8NG95 312 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 SELENOMQ8WWX9 145 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 CMTM5Q96DZ9 223 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 CMTM7Q96FZ5 175 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 IMMP1LQ96LU5 166 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 PTCHD1Q96NR3 888 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 LPAR4Q99677 370 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 TBCDQ9BTW9 1192 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 MS4A8Q9BY19 250 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 RBCK1Q9BYM8 510 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 AKTIPQ9H8T0 292 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 TEKT2Q9UIF3 430 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 B3GNT3Q9Y2A9 372 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 TMED5Q9Y3A6 229 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 MMACHCQ9Y4U1 282 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 CAPN7Q9Y6W3 813 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 SPACA6W5XKT8 324 aa12.61□□□□□ -0.39
CLK3-218ENST00000566926 B4GALT2O60909 372 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 LINC00032P0C843 101 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 NCF2P19878 526 aaPredicted RBP12.6□□□□□ -0.39
CLK3-218ENST00000566926 MAPK1P28482 360 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 PRDX6P30041 224 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 TSFMP43897 325 aaKnown RBP12.6□□□□□ -0.39
CLK3-218ENST00000566926 ARFIP1P53367 373 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 RAB38P57729 211 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 OR4D2P58180 307 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 MFAP5Q13361 173 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 ESPL1Q14674 2120 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 AP5B1Q2VPB7 878 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 BTBD16Q32M84 506 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 GALNTL6Q49A17 601 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 SFT2D3Q587I9 215 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 SLC6A19Q695T7 634 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 PLAG1Q6DJT9 500 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 LANCL3Q6ZV70 420 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 VN1R5Q7Z5H4 357 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 M1APQ8TC57 530 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 QRFPRQ96P65 431 aa12.6□□□□□ -0.39
CLK3-218ENST00000566926 F2RL3Q96RI0 385 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms