RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 FOLH1Q04609 750 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 CUL3Q13618 768 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 HSDL2Q6YN16 418 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 TMEM156Q8N614 296 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 LRRN4CLQ8ND94 238 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 DOK4Q8TEW6 326 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 ITLN2Q8WWU7 325 aaPredicted RBP13.6□□□□□ -0.23
FANCA-220ENST00000566409 TMEM125Q96AQ2 219 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 PPWD1Q96BP3 646 aaKnown RBP13.6□□□□□ -0.23
FANCA-220ENST00000566409 MTFMTQ96DP5 389 aaKnown RBP13.6□□□□□ -0.23
FANCA-220ENST00000566409 SCYL1Q96KG9 808 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 RASL10BQ96S79 203 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 CCDC77Q9BR77 488 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 NTMT1Q9BV86 223 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 TXLNGYQ9BZA5 131 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 EPB41L4BQ9H329 900 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 PRM3Q9NNZ6 103 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 DEPPQ9NTK1 212 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 SH3BGRL2Q9UJC5 107 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 TINAGQ9UJW2 476 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 SPACA6W5XKT8 324 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 CREBBPQ92793 2442 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 EXOC1LA0A1B0GW35 172 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 PINLYPA6NC86 204 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 SYNDIG1LA6NDD5 238 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 GLOD5A6NK44 160 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 PEX1O43933 1283 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 GBAP04062 536 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 IGKV3-11P04433 115 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 RPS17P08708 135 aaKnown RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 ABHD2P08910 425 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 SNRPAP09012 282 aaKnown RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 ZNF24P17028 368 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 CNTFP26441 200 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 PTGER1P34995 402 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 SOX3P41225 446 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 CCNG1P51959 295 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 GPR85P60893 370 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 TSNAXIP1Q2TAA8 658 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.59□□□□□ -0.23
FANCA-220ENST00000566409 ADGRD1Q6QNK2 874 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 TIFABQ6ZNK6 161 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 Q6ZPB1 254 aaPredicted RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 SPPL2CQ8IUH8 684 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 CEP112Q8N8E3 955 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 FAM98AQ8NCA5 519 aaKnown RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 OR8K3Q8NH51 312 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 TANKQ92844 425 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 REPS1Q96D71 796 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 SENP5Q96HI0 755 aaPredicted RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 MRPL57Q9BQC6 102 aaKnown RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 MRPL46Q9H2W6 279 aaKnown RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 SEMA4BQ9NPR2 832 aaPredicted RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 MS4A12Q9NXJ0 267 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 PHF11Q9UIL8 331 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 ZNF225Q9UK10 706 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 PPT2Q9UMR5 302 aa13.59□□□□□ -0.23
FANCA-220ENST00000566409 KLF13Q9Y2Y9 288 aaPredicted RBP13.59□□□□□ -0.23
FANCA-220ENST00000566409 ADGRG4Q8IZF6 3080 aa13.58□□□□□ -0.23
FANCA-220ENST00000566409 FBN2P35556 2912 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 A0A0G2JMM0 328 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 A0A1W2PPB8 328 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 A0A1W2PRS3 328 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 A0A1W2PS29 197 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 A8MT66 165 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 KIR3DP1A8MWS1 328 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 PGRMC2O15173 223 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 RIPK2O43353 540 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 SMIM24O75264 130 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 RHOXF2BP0C7M4 288 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 FAM58BPP0C7Q3 252 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 TSPAN8P19075 237 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 CDH13P55290 713 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 RBPJQ06330 500 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 ZNF750Q32MQ0 723 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 FRG2Q64ET8 278 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 IL20RBQ6UXL0 311 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 TRMT10CQ7L0Y3 403 aaKnown RBP13.58□□□□□ -0.24
FANCA-220ENST00000566409 TAOK1Q7L7X3 1001 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 C9orf40Q8IXQ3 194 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 IFT20Q8IY31 132 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 ZFP62Q8NB50 900 aaPredicted RBP13.58□□□□□ -0.24
FANCA-220ENST00000566409 PSD4Q8NDX1 1056 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 OR4F6Q8NGB9 312 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 C16orf52Q8NHV5 167 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 ZNF483Q8TF39 744 aaPredicted RBP13.58□□□□□ -0.24
FANCA-220ENST00000566409 ASB15Q8WXK1 588 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 ATP6V1E2Q96A05 226 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 FRG2BQ96QU4 278 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 RHOXF2Q9BQY4 288 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 CENPKQ9BS16 269 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 C1QTNF3Q9BXJ4 246 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 FARSBQ9NSD9 589 aaKnown RBP13.58□□□□□ -0.24
FANCA-220ENST00000566409 TMEM216Q9P0N5 145 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 TMCO1Q9UM00 188 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 NINQ8N4C6 2090 aa13.58□□□□□ -0.24
FANCA-220ENST00000566409 A8MVJ9 347 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 KLRC4-KLRK1H3BQV0 150 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 HS6ST1O60243 411 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 GPR75O95800 540 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms