RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 IFNA2P01563 188 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 JUNDP17535 347 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 CELP19835 753 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 KCNC1P48547 511 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 CD97P48960 835 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 DPY19L3Q6ZPD9 716 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 ALDH16A1Q8IZ83 802 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 NLGN4XQ8N0W4 816 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 RAD9AQ99638 391 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 KCNN3Q9UGI6 736 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 A0A1W2PQU0 124 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 PRLP01236 227 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 CSF2P04141 144 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 CD3GP09693 182 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 LCN1P31025 176 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 GGT2P36268 569 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 FASLGP48023 281 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 DIO3P55073 304 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 LRIT3Q3SXY7 679 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 LRFN4Q6PJG9 635 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 USP53Q70EK8 1073 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 GALNT12Q8IXK2 581 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 KRTCAP2Q8N6L1 136 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 OR56A3Q8NH54 315 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 PEBP4Q96S96 227 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 hCG_1807616A0A1W2PRN6 198 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 OTOL1A6NHN0 477 aaPredicted RBP13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 SOCS2O14508 198 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 F2P00734 622 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 NPPAP01160 153 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 HSD11B2P80365 405 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 ZNF33AQ06730 810 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 PPP1R3AQ16821 1122 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 MEDAGQ5VYS4 303 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 TRAM1L1Q8N609 369 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 PSD4Q8NDX1 1056 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 PROKR1Q8TCW9 393 aa13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 DAZLQ92904 295 aaKnown RBP13.06□□□□□ -0.32
CX3CL1-204ENST00000565912 SSX5O60225 188 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 DFNA5O60443 496 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 BEST1O76090 585 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CKMT1AP12532 417 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 AOC1P19801 751 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 HSD17B12Q53GQ0 312 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 TMEM107Q6UX40 140 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 ZNF584Q8IVC4 421 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 IL17FQ96PD4 163 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 EXTL2Q9UBQ6 330 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 H3BUI4 141 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 OR2B3O76000 313 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CD40LGP29965 261 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 NPY5RQ15761 445 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 FAM69BQ5VUD6 431 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 OR2T33Q8NG76 320 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 RAB7BQ96AH8 199 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 RADILQ96JH8 1075 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CA14Q9ULX7 337 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 PSAT1Q9Y617 370 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 FEZF1A0PJY2 475 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CLIC3O95833 236 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 GRPRP30550 384 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 USF2Q15853 346 aaPredicted RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 VMACQ2NL98 169 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 POPDC3Q9HBV1 291 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CCRL2O00421 344 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 DLGAP1O14490 977 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 KLF11O14901 512 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 SEC14L5O43304 696 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 EMC8O43402 210 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 BCAS2O75934 225 aaPredicted RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 C6orf136Q5SQH8 315 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CES4AQ5XG92 561 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 SLC27A4Q6P1M0 643 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 PLD6Q8N2A8 252 aaKnown RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 TXNDC5Q8NBS9 432 aaKnown RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 KATNBL1Q9H079 304 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 NKX1-2Q9UD57 310 aaPredicted RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 H7C417 338 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 PRKCAP17252 672 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 AK4P27144 223 aaPredicted RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CATSPEREQ5SY80 951 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 CSNK1A1LQ8N752 337 aa13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 TSACCQ96A04 125 aaPredicted RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 ZBTB20Q9HC78 741 aaPredicted RBP13.05□□□□□ -0.32
CX3CL1-204ENST00000565912 FESP07332 822 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 ACRV1P26436 265 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 GNMTQ14749 295 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 GTF2IRD2BQ6EKJ0 949 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 NANOGP8Q6NSW7 305 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 TIFABQ6ZNK6 161 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 GTF2IRD2Q86UP8 949 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 KBTBD6Q86V97 674 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 C1orf74Q96LT6 269 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 DPH7Q9BTV6 452 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 NANOGQ9H9S0 305 aa13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 APOBEC3BQ9UH17 382 aaKnown RBP13.04□□□□□ -0.32
CX3CL1-204ENST00000565912 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms