RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PCDHGB4Q9UN71 923 aa7.33□□□□□ -1.24
CDH1-208ENST00000565810 FARSAQ9Y285 508 aaKnown RBP7.33□□□□□ -1.24
CDH1-208ENST00000565810 PTRH2Q9Y3E5 179 aaKnown RBP7.33□□□□□ -1.24
CDH1-208ENST00000565810 CEP250Q9BV73 2442 aa7.33□□□□□ -1.24
CDH1-208ENST00000565810 KNTC1P50748 2209 aa7.33□□□□□ -1.24
CDH1-208ENST00000565810 PIEZO1Q92508 2521 aa7.33□□□□□ -1.24
CDH1-208ENST00000565810 CNOT1A5YKK6 2376 aaKnown RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 CCDC154A6NI56 674 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 PCDH17O14917 1159 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ANKRD28O15084 1053 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ANGPT2O15123 496 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 PGRMC2O15173 223 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 CFLARO15519 480 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 PDPK1O15530 556 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 OR10H2O60403 315 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 LDB3O75112 727 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ALOX12BO75342 701 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 JRKO75564 520 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 PRKRAO75569 313 aaKnown RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 IFNA16P05015 189 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 PGRP06401 933 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 SNRPB2P08579 225 aaKnown RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 PORP16435 677 aaPredicted RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 TNNI3P19429 210 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 CSNK2A2P19784 350 aaPredicted RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 FOLR3P41439 243 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 STAT5AP42229 794 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 MANFP55145 182 aaKnown RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 PCBP4P57723 403 aaKnown RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 FOLH1Q04609 750 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 LRRC74AQ0VAA2 488 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 STX5Q13190 355 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 DNASE1L3Q13609 305 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 PDE7AQ13946 482 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 NSDHLQ15738 373 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 UGT8Q16880 541 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 FAM174BQ3ZCQ3 159 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 MMEL1Q495T6 779 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 SPANXN4Q5MJ08 99 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 LCN10Q6JVE6 187 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ANKRD26P1Q6NSI1 321 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 FAM198BQ6UWH4 519 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 RIPOR1Q6ZS17 1223 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 SHISA6Q6ZSJ9 500 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 CAMKMTQ7Z624 323 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 DTX1Q86Y01 620 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 OR4N5Q8IXE1 308 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 MMP21Q8N119 569 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 OR7A2PQ8NGA2 310 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 OR8J2Q8NGG1 315 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 OR9I1Q8NGQ6 314 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 OR2Y1Q8NGV0 311 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ZFP28Q8NHY6 868 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 TSPEARQ8WU66 669 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 CT55Q8WUE5 264 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 FGF11Q92914 225 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 NKD1Q969G9 470 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 COQ8BQ96D53 544 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ERP27Q96DN0 273 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 SPDL1Q96EA4 605 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ZBED6CLQ96FA7 236 aaPredicted RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 ZNF764Q96H86 408 aaPredicted RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 DGAT2Q96PD7 388 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 OR52E6Q96RD3 313 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 SPSB2Q99619 263 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 TUBB6Q9BUF5 446 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 SLC25A23Q9BV35 468 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ALOXE3Q9BYJ1 711 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 MYLK2Q9H1R3 596 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ACTL8Q9H568 366 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 ZNF385DQ9H6B1 395 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 GPN2Q9H9Y4 310 aaPredicted RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 LANCL2Q9NS86 450 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 SEMA3GQ9NS98 782 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 FAM120CQ9NX05 1096 aaKnown RBP7.32□□□□□ -1.24
CDH1-208ENST00000565810 ARMCX1Q9P291 453 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 C5AR2Q9P296 337 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 C3orf18Q9UK00 162 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 CES1P1Q9UKY3 287 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 WASF3Q9UPY6 502 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 NDUFAF1Q9Y375 327 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 DCHS1Q96JQ0 3298 aa7.32□□□□□ -1.24
CDH1-208ENST00000565810 HEATR5BQ9P2D3 2071 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 LOC100653049A0A140TA62 436 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 PRSS51A0A1B0GVH4 220 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 A0A1W2PRB8 838 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 IDSB3KWA1 339 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 C9JVG2 144 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 NR5A2O00482 541 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 RNASET2O00584 256 aaKnown RBP7.31□□□□□ -1.24
CDH1-208ENST00000565810 FGF17O60258 216 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 KRT34O76011 436 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 SLC35E2P0CK97 266 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 C8orf89P0DMQ9 161 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 LAMP1P11279 417 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 CPMP14384 443 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 NT5EP21589 574 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 PTPN4P29074 926 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 IL12AP29459 219 aa7.31□□□□□ -1.24
CDH1-208ENST00000565810 PRDX6P30041 224 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms