RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 KCTD4Q8WVF5 259 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 DGAT2Q96PD7 388 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 SPOCK3Q9BQ16 436 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 FAM173AQ9BQD7 235 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 OR51B5Q9H339 312 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 ZDHHC11Q9H8X9 412 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 ACTR8Q9H981 624 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 DMRT3Q9NQL9 472 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 SNX15Q9NRS6 342 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 ZDHHC18Q9NUE0 388 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 LYARQ9NX58 379 aaKnown RBP13.91□□□□□ -0.18
SPG7-210ENST00000564409 MTRF1LQ9UGC7 380 aaKnown RBP13.91□□□□□ -0.18
SPG7-210ENST00000564409 LRBAP50851 2863 aa13.91□□□□□ -0.18
SPG7-210ENST00000564409 A0A096LPK6 155 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 FOXE1O00358 373 aaPredicted RBP13.9□□□□□ -0.18
SPG7-210ENST00000564409 CDC40O60508 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
SPG7-210ENST00000564409 TPOP07202 933 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 SSTR2P30874 369 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 GALNSP34059 522 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 RFC3P40938 356 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 GPR85P60893 370 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 TNFRSF17Q02223 184 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 PLGLB1Q02325 96 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 PFKFB4Q16877 469 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 PIGGQ5H8A4 983 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 CD163Q86VB7 1156 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 ST13P4Q8IZP2 240 aaPredicted RBP13.9□□□□□ -0.18
SPG7-210ENST00000564409 L3MBTL4Q8NA19 623 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 SLC22A8Q8TCC7 542 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 ASB5Q8WWX0 329 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 SENP5Q96HI0 755 aaPredicted RBP13.9□□□□□ -0.18
SPG7-210ENST00000564409 FBXL20Q96IG2 436 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 ACSS3Q9H6R3 686 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 WDR41Q9HAD4 459 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 SACM1LQ9NTJ5 587 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 DEPPQ9NTK1 212 aa13.9□□□□□ -0.18
SPG7-210ENST00000564409 HMX2A2RU54 273 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 PLPP1O14494 284 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 PROM1O43490 865 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 FGF17O60258 216 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 GLSO94925 669 aaPredicted RBP13.89□□□□□ -0.19
SPG7-210ENST00000564409 ETHE1O95571 254 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 IGKV3-11P04433 115 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 P04436 131 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 RBP1P09455 135 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 ALOX15P16050 662 aaPredicted RBP13.89□□□□□ -0.19
SPG7-210ENST00000564409 GMPRP36959 345 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 DDX39BQ13838 428 aaKnown RBP13.89□□□□□ -0.19
SPG7-210ENST00000564409 GTF2H2Q13888 395 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 HYAL4Q2M3T9 481 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 MRM1Q6IN84 353 aaKnown RBP13.89□□□□□ -0.19
SPG7-210ENST00000564409 GTF2H2CQ6P1K8 395 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 ACAD11Q709F0 780 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 TAOK1Q7L7X3 1001 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 MYLK4Q86YV6 388 aaPredicted RBP13.89□□□□□ -0.19
SPG7-210ENST00000564409 ACBD4Q8NC06 268 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 OR52N2Q8NGI0 321 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 SDCCAG3Q96C92 435 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 SCYL1Q96KG9 808 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 GPR78Q96P69 363 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 MTERF1Q99551 399 aaKnown RBP13.89□□□□□ -0.19
SPG7-210ENST00000564409 FUT8Q9BYC5 575 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 TTTY12Q9BZ98 90 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 TRIM8Q9BZR9 551 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 DDX31Q9H8H2 851 aaKnown RBP13.89□□□□□ -0.19
SPG7-210ENST00000564409 IPPKQ9H8X2 491 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 LIN28AQ9H9Z2 209 aaKnown RBP13.89□□□□□ -0.19
SPG7-210ENST00000564409 IL1RL2Q9HB29 575 aa13.89□□□□□ -0.19
SPG7-210ENST00000564409 OR6C76A6NM76 312 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 SAP18O00422 153 aaKnown RBP13.88□□□□□ -0.19
SPG7-210ENST00000564409 BCKDKO14874 412 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 SUSD5O60279 629 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 SEMA3DO95025 777 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 CLDN9O95484 217 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 GPR75O95800 540 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 IGHG3P01860 377 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 ALDOAP04075 364 aaKnown RBP13.88□□□□□ -0.19
SPG7-210ENST00000564409 COL6A2P12110 1019 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 CAPN3P20807 821 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 SERPINB9P50453 376 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 IRF9Q00978 393 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 SLC7A5Q01650 507 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 FOLH1Q04609 750 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 CPSF6Q16630 551 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPG7-210ENST00000564409 WHAMMP3Q1A5X7 153 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 SPRED3Q2MJR0 410 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 CYP20A1Q6UW02 462 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 C16orf47Q6ZP98 133 aaPredicted RBP13.88□□□□□ -0.19
SPG7-210ENST00000564409 FAM109AQ8N4B1 249 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 RND1Q92730 232 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 ISL2Q96A47 359 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 C14orf79Q96F83 325 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 SERPINI1Q99574 410 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 LRRC1Q9BTT6 524 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 ENKD1Q9H0I2 346 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 ATG4BQ9Y4P1 393 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 IKBKGQ9Y6K9 419 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 HCFC1P51610 2035 aa13.88□□□□□ -0.19
SPG7-210ENST00000564409 INTS1Q8N201 2190 aaKnown RBP13.88□□□□□ -0.19
SPG7-210ENST00000564409 NINQ8N4C6 2090 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms