RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 C22orf15Q8WYQ4 148 aa9.45□□□□□ -0.9
HDGFL3-204ENST00000563790 FAHD2AQ96GK7 314 aa9.45□□□□□ -0.9
HDGFL3-204ENST00000563790 BTBD6Q96KE9 485 aa9.45□□□□□ -0.9
HDGFL3-204ENST00000563790 DOHHQ9BU89 302 aa9.45□□□□□ -0.9
HDGFL3-204ENST00000563790 CNIH4Q9P003 139 aa9.45□□□□□ -0.9
HDGFL3-204ENST00000563790 DLGAP4Q9Y2H0 992 aa9.45□□□□□ -0.9
HDGFL3-204ENST00000563790 ALMS1Q8TCU4 4167 aa9.45□□□□□ -0.9
HDGFL3-204ENST00000563790 IGKV1-8A0A0C4DH67 115 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 A0A1W2PPV9 198 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 E7EQL1 145 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 PLOD2O00469 737 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 SNUPNO95149 360 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 NDST3O95803 873 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 MSMBP08118 114 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 CSF1P09603 554 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 MAOAP21397 527 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 CMPK1P30085 196 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 MIPP30301 263 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 IRF9Q00978 393 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 DBN1Q16643 649 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 TMEM214Q6NUQ4 689 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 P4HA3Q7Z4N8 544 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 LDB1Q86U70 411 aaPredicted RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 PSTKQ8IV42 348 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 DCUN1D3Q8IWE4 304 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 OR4F5Q8NH21 305 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 GABPB2Q8TAK5 448 aaPredicted RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 HMGCLL1Q8TB92 370 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 DDB2Q92466 427 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 DVL3Q92997 716 aaPredicted RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 THAP11Q96EK4 314 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 COPS8Q99627 209 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 AGPAT1Q99943 283 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 ZWILCHQ9H900 591 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 ANKHQ9HCJ1 492 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 EIF2B3Q9NR50 452 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 PCSK1NQ9UHG2 260 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 ZDHHC2Q9UIJ5 367 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 PTBP2Q9UKA9 531 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 SLC39A10Q9ULF5 831 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 PKP3Q9Y446 797 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 PMF1-BGLAPU3KQ54 211 aa9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 HUWE1Q7Z6Z7 4374 aaKnown RBP9.44□□□□□ -0.9
HDGFL3-204ENST00000563790 IGLV3-16A0A075B6K0 115 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 SRP72O76094 671 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 PRSS23O95084 383 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 RPN2P04844 631 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 PAMP19021 973 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 PTPN3P26045 913 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 RPL21P46778 160 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 PPIDQ08752 370 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 GUSBP1Q15486 140 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 DPYSL2Q16555 572 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 HECTD2Q5U5R9 776 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 SAXO2Q658L1 398 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 ZNF425Q6IV72 752 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 HSDL2Q6YN16 418 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 ZNF793Q6ZN11 406 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 IRF2BP2Q7Z5L9 587 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 ANKK1Q8NFD2 765 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 NANPQ8TBE9 248 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 RNF217Q8TC41 542 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 S100PBPQ96BU1 408 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 SORCS2Q96PQ0 1159 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 FANCFQ9NPI8 374 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 NECTIN3Q9NQS3 549 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 PRDM9Q9NQV7 894 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 TESQ9UGI8 421 aaKnown RBP9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 C15orf41Q9Y2V0 281 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 CORINQ9Y5Q5 1042 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 CHCHD2Q9Y6H1 151 aaPredicted RBP9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 DNAH10Q8IVF4 4471 aa9.43□□□□□ -0.9
HDGFL3-204ENST00000563790 NPIPA5A0A0B4J1W7 369 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 SLC22A20A6NK97 555 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 NPIPA7E9PJI5 369 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 BUD23O43709 281 aaKnown RBP9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 STK10O94804 968 aaKnown RBP9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 NPIPA8P0DM63 369 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 PSMA2P25787 234 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 UBE2HP62256 183 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 CHRNB3Q05901 458 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 CCNIQ14094 377 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 BRD3Q15059 726 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 TAB1Q15750 504 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 TPD52L1Q16890 204 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 TSNAXIP1Q2TAA8 658 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 DEFB121Q5J5C9 76 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 FNDC7Q5VTL7 733 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 E4F1Q66K89 784 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 CCDC70Q6NSX1 233 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 PIANPQ8IYJ0 282 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 STEAP2Q8NFT2 490 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 OR5T3Q8NGG3 340 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 PHF21AQ96BD5 680 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 MTBPQ96DY7 904 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 PKP4Q99569 1192 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 HSD3B7Q9H2F3 369 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 PLSCR4Q9NRQ2 329 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 PCYOX1Q9UHG3 505 aa9.42□□□□□ -0.9
HDGFL3-204ENST00000563790 RPUSD1Q9UJJ7 312 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms