RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 EGFL8Q99944 293 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 MRPL45Q9BRJ2 306 aaKnown RBP4.48□□□□□ -1.69
LINC00254-201ENST00000563416 TUBB2BQ9BVA1 445 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 SDCBP2Q9H190 292 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 MMADHCQ9H3L0 296 aaPredicted RBP4.48□□□□□ -1.69
LINC00254-201ENST00000563416 FAM124BQ9H5Z6 455 aaPredicted RBP4.48□□□□□ -1.69
LINC00254-201ENST00000563416 ANKZF1Q9H8Y5 726 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 LEF1Q9UJU2 399 aaPredicted RBP4.48□□□□□ -1.69
LINC00254-201ENST00000563416 CDH9Q9ULB4 789 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 ASB3Q9Y575 518 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 RALGAPA1Q6GYQ0 2036 aa4.48□□□□□ -1.69
LINC00254-201ENST00000563416 MUC6Q6W4X9 2439 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 TP53BP1Q12888 1972 aaPredicted RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 VPS13AQ96RL7 3174 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 MYBPHLA2RUH7 354 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 HTR3EA5X5Y0 456 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 MAGEB17A8MXT2 336 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 ANHXE9PGG2 379 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 RTCAO00442 366 aaKnown RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 PRRG1O14668 218 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 DCXO43602 365 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 STX10O60499 249 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 DIAPH2O60879 1101 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 GAS8-AS1O95177 125 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 GNA14O95837 355 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 TRUB2O95900 331 aaKnown RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 MBD3O95983 291 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 PNPP00491 289 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 HAPLN1P10915 354 aaPredicted RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 VPREB1P12018 145 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 NR1D1P20393 614 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 ACAT1P24752 427 aaKnown RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 LMO2P25791 158 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 CCR2P41597 374 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 MAGEA11P43364 429 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 GCLMP48507 274 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 TUFMP49411 452 aaKnown RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 TNNC1P63316 161 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 TUBB4BP68371 445 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 NOP14P78316 857 aaKnown RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 NTHL1P78549 312 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 TWF1Q12792 350 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 UBE2V1Q13404 147 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 HTR4Q13639 388 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 ZNF273Q14593 569 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 SNAPC1Q16533 368 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 CBWD6Q4V339 395 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 ZRANB3Q5FWF4 1079 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 NHSL2Q5HYW2 709 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 WDR38Q5JTN6 314 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 CBWD3Q5JTY5 395 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 CEP85LQ5SZL2 805 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 KRT39Q6A163 491 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 KLHL10Q6JEL2 608 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 LINC00696Q6ZRV3 163 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 ZNF534Q76KX8 674 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 SIX6OS1Q8N1H7 587 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 MLKLQ8NB16 471 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 FBXL13Q8NEE6 735 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 OR10S1Q8NGN2 331 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 KCNE4Q8WWG9 221 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 KRT35Q92764 455 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 CORO2AQ92828 525 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 SEMA4DQ92854 862 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 FGF13Q92913 245 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 PSMG2Q969U7 264 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 MYLPFQ96A32 169 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 EEF2KMTQ96G04 330 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 C17orf77Q96MU5 243 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 F2RL3Q96RI0 385 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 MYADMQ96S97 322 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 SYT15Q9BQS2 421 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 SMYD3Q9H7B4 428 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 CYP3A43Q9HB55 503 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 APOBEC3GQ9HC16 384 aaKnown RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 ABCB8Q9NUT2 735 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 ARMCX3Q9UH62 379 aaPredicted RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 MUTYHQ9UIF7 546 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 RWDD2AQ9UIY3 292 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 CDH7Q9ULB5 785 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 LIPGQ9Y5X9 500 aa4.47□□□□□ -1.69
LINC00254-201ENST00000563416 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.47□□□□□ -1.69
LINC00254-201ENST00000563416 TNRC6BQ9UPQ9 1833 aaKnown RBP4.46□□□□□ -1.69
LINC00254-201ENST00000563416 A0A087WV48 116 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 OR2M5A3KFT3 312 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 LRRD1A4D1F6 860 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 A4D1N5 150 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 C5orf60A6NFR6 353 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 ANXA2P2A6NMY6 339 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 ENO4A6NNW6 628 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 SMIM1B2RUZ4 78 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 BLOC1S5-TXNDC5H3BN57 136 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 ZNF197O14709 1029 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 ZNF263O14978 683 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 ZBTB14O43829 449 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 NOL4O94818 638 aa4.46□□□□□ -1.7
LINC00254-201ENST00000563416 SLCO2B1O94956 709 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms