RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 DCAF13Q9NV06 445 aaKnown RBP17.04■□□□□ 0.32
COMMD4-208ENST00000563220 TMEM9Q9P0T7 183 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 PHF11Q9UIL8 331 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 LY6G6EA0A0G2JKS1 128 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 RNF103-CHMP3A0A140T963 221 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 TPST1O60507 370 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 MED26O95402 600 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 KRT75O95678 551 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 CAPNS1P04632 268 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 RETP07949 1114 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 PTGER1P34995 402 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 BUD31P41223 144 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-208ENST00000563220 TNFRSF17Q02223 184 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 NKG7Q16617 165 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 SAXO2Q658L1 398 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 ERMP1Q7Z2K6 904 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 OR4C6Q8NH72 309 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 ZNF285Q96NJ3 590 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 CD180Q99467 661 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 DUSP23Q9BVJ7 150 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 SPATA9Q9BWV2 254 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 U3KQA8 63 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 PI4KAP42356 2102 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 PCDH15Q96QU1 1955 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 SGK494L7N484 410 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 HNRNPRO43390 633 aaKnown RBP17.03■□□□□ 0.32
COMMD4-208ENST00000563220 SERPINA1P01009 418 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 AVPR2P30518 371 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 NTSP30990 170 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 CSF2RBP32927 897 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 MLLT3P42568 568 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-208ENST00000563220 CEBPEQ15744 281 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 LPAL2Q16609 132 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 TMEM126BQ8IUX1 230 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 CCDC74AQ96AQ1 378 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 PPWD1Q96BP3 646 aaKnown RBP17.03■□□□□ 0.32
COMMD4-208ENST00000563220 NEURL3Q96EH8 262 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 RNF145Q96MT1 663 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 CHID1Q9BWS9 393 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 KLHL4Q9C0H6 718 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 CHRNA10Q9GZZ6 450 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 EPB41L1Q9H4G0 881 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 LYRM4Q9HD34 91 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 PDE7BQ9NP56 450 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 SOHLH2Q9NX45 425 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 FAF1Q9UNN5 650 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-208ENST00000563220 PLCL2Q9UPR0 1127 aa17.03■□□□□ 0.32
COMMD4-208ENST00000563220 SIGLEC6O43699 453 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 DUX1O43812 170 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 PRKD3O94806 890 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 ZBTB11O95625 1053 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-208ENST00000563220 MT-ND1P03886 318 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 ALPPL2P10696 532 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 CSNK2A2P19784 350 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-208ENST00000563220 HOXD12P35452 270 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 CCT3P49368 545 aaKnown RBP17.02■□□□□ 0.32
COMMD4-208ENST00000563220 GPLD1P80108 840 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 SIM1P81133 766 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-208ENST00000563220 VAC14Q08AM6 782 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 FADDQ13158 208 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 VEZF1Q14119 521 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 MAP7Q14244 749 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 ZNF528Q3MIS6 628 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 C6orf120Q7Z4R8 191 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 GALNT10Q86SR1 603 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 CA13Q8N1Q1 262 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 CEP76Q8TAP6 659 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 ENTPD4Q9Y227 616 aa17.02■□□□□ 0.32
COMMD4-208ENST00000563220 MYO15AQ9UKN7 3530 aa17.02■□□□□ 0.31
COMMD4-208ENST00000563220 FAM149AA5PLN7 773 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 TXNDC9O14530 226 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 KDELR2P33947 212 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 GPC1P35052 558 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 SEPHS1P49903 392 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 RPS26P62854 115 aaKnown RBP17.01■□□□□ 0.31
COMMD4-208ENST00000563220 SPIDRQ14159 915 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 KCNAB1Q14722 419 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 SFT2D3Q587I9 215 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 TRIM61Q5EBN2 209 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 IZUMO2Q6UXV1 221 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 PLXDC1Q8IUK5 500 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 OR4N5Q8IXE1 308 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 OR10Q1Q8NGQ4 319 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 OR9A4Q8NGU2 314 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 ASPSCR1Q9BZE9 553 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 AGPAT4Q9NRZ5 378 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 OLAHQ9NV23 265 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 MS4A12Q9NXJ0 267 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 PSME2Q9UL46 239 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 CYR61O00622 381 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 FOXS1O43638 330 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 PEX1O43933 1283 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 GCM2O75603 506 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-208ENST00000563220 FASP25445 335 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 TLX1P31314 330 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-208ENST00000563220 EEF1A2Q05639 463 aaKnown RBP17.01■□□□□ 0.31
COMMD4-208ENST00000563220 ANGPT1Q15389 498 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 GRAMD1BQ3KR37 738 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 SPDYE7PQ495Y7 208 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 SNAP47Q5SQN1 464 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms