RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 NLNQ9BYT8 704 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 SLC12A5Q9H2X9 1139 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 SEMA6BQ9H3T3 888 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 NSUN3Q9H649 340 aaKnown RBP4.73□□□□□ -1.65
TCF4-215ENST00000562638 KIR3DX1Q9H7L2 352 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 ZMAT3Q9HA38 289 aaKnown RBP4.73□□□□□ -1.65
TCF4-215ENST00000562638 LHX9Q9NQ69 397 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 GJB4Q9NTQ9 266 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 RCC2Q9P258 522 aaKnown RBP4.73□□□□□ -1.65
TCF4-215ENST00000562638 PHF11Q9UIL8 331 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 USP21Q9UK80 565 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 OGDHLQ9ULD0 1010 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 PIN4Q9Y237 131 aaKnown RBP4.73□□□□□ -1.65
TCF4-215ENST00000562638 SLC5A6Q9Y289 635 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 PLEKHA6Q9Y2H5 1048 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 NPTNQ9Y639 398 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 USP3Q9Y6I4 520 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 V9GYH0 126 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 NUP153P49790 1475 aaKnown RBP4.73□□□□□ -1.65
TCF4-215ENST00000562638 LMTK3Q96Q04 1460 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 C3P01024 1663 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 ADAMTSL3P82987 1691 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 KDM3BQ7LBC6 1761 aa4.73□□□□□ -1.65
TCF4-215ENST00000562638 PRG4Q92954 1404 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 KIAA1551Q9HCM1 1747 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TCRBV21S2A2A0A5A6 115 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TTC24A2A3L6 582 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 C7orf66A4D0T2 115 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 C5orf51A6NDU8 294 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 CXorf65A6NEN9 183 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TCAF2A6NFQ2 919 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 COLCA2A8K830 154 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 A8MWP6 167 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 CDRT15L2A8MXV6 281 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 LRRN3E7EW58 273 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 F5H423 210 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 TSTD3H0UI37 97 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TP53I11O14683 189 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 FABP7O15540 132 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 OIP5O43482 229 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 XPNPEP2O43895 674 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 NRP2O60462 931 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 ICOSLGO75144 302 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TULP3O75386 442 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 RAD17O75943 681 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 RECQL5O94762 991 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 TBX18O95935 607 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 LGI1O95970 557 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 AK1P00568 194 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 HPRP00739 348 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 IL1AP01583 271 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 MMP1P03956 469 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 PSAPP07602 524 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 CYC1P08574 325 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 MELTFP08582 738 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 GIMD1P0DJR0 217 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TSPAN8P19075 237 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 NPR2P20594 1047 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 C4BPBP20851 252 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 ELK4P28324 431 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 LCN1P31025 176 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 KIR2DL3P43628 341 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 PITPNBP48739 271 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 EVX1P49640 407 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 IDH3AP50213 366 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 IDH3GP51553 393 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 CCR6P51684 374 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 PRKXP51817 358 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TDGF1P3P51864 188 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 DGKEP52429 567 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 ATXN3P54252 364 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 CASP7P55210 303 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 SOX10P56693 466 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 SELENOVP59797 346 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 GMFBP60983 142 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 LSM6P62312 80 aaKnown RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 ARF6P62330 175 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 REEP5Q00765 189 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 IL5RAQ01344 420 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 POU4F1Q01851 419 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 NRG1Q02297 640 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 EMX1Q04741 257 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 GABPAQ06546 454 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 SCN1BQ07699 218 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 RASGEF1BQ0VAM2 473 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TRA2AQ13595 282 aaKnown RBP eCLIP4.72□□□□□ -1.65
TCF4-215ENST00000562638 FGFBP1Q14512 234 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 PRPSAP1Q14558 356 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 MED22Q15528 200 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TRIP4Q15650 581 aaPredicted RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 SNAPC1Q16533 368 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 MEP1AQ16819 746 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 VPS26BQ4G0F5 336 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 COQ5Q5HYK3 327 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 ZNF311Q5JNZ3 666 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 INTS6LQ5JSJ4 861 aaKnown RBP4.72□□□□□ -1.65
TCF4-215ENST00000562638 EOGTQ5NDL2 527 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 GPRC6AQ5T6X5 926 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 TSTD2Q5T7W7 516 aa4.72□□□□□ -1.65
TCF4-215ENST00000562638 ABLIM2Q6H8Q1 611 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms