RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 KIAA0513O60268 411 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 SH3BGRLO75368 114 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 ANXA9O76027 345 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 FOLR2P14207 255 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 VCLP18206 1134 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 OR1D2P34982 312 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 CTNNB1P35222 781 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 SPRP35270 261 aaPredicted RBP2.39□□□□□ -2.03
DENND4A-205ENST00000562540 GSK3BP49841 420 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 TNFSF10P50591 281 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 HLCSP50747 726 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 STXBP2Q15833 593 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 SMU1Q2TAY7 513 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 PRAMEF8Q5VWM4 474 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 KCTD11Q693B1 232 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 CAPN13Q6MZZ7 669 aaPredicted RBP2.39□□□□□ -2.03
DENND4A-205ENST00000562540 EMBQ6PCB8 327 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 Q6ZRG5 221 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 NUFIP2Q7Z417 695 aaKnown RBP2.39□□□□□ -2.03
DENND4A-205ENST00000562540 RPAINQ86UA6 219 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 C17orf64Q86WR6 236 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 LAX1Q8IWV1 398 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 TRPV3Q8NET8 790 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 TCP11Q8WWU5 503 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 MRPL24Q96A35 216 aaKnown RBP2.39□□□□□ -2.03
DENND4A-205ENST00000562540 VMP1Q96GC9 406 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 RAB40CQ96S21 281 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 S1PR3Q99500 378 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 SSX3Q99909 188 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 AGPAT1Q99943 283 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 DDX50Q9BQ39 737 aaKnown RBP2.39□□□□□ -2.03
DENND4A-205ENST00000562540 WWP1Q9H0M0 922 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 MARCH7Q9H992 704 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 ARGLU1Q9NWB6 273 aaPredicted RBP2.39□□□□□ -2.03
DENND4A-205ENST00000562540 SPG21Q9NZD8 308 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 TEKT2Q9UIF3 430 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 PSORS1C1Q9UIG5 152 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 TSPAN16Q9UKR8 245 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 FBXW2Q9UKT8 454 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 STX8Q9UNK0 236 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 EXOC7Q9UPT5 735 aa2.39□□□□□ -2.03
DENND4A-205ENST00000562540 NIP7Q9Y221 180 aaKnown RBP eCLIP2.39□□□□□ -2.03
DENND4A-205ENST00000562540 TRBV5-4A0A0C4DH59 114 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 SMIM30A4D0T7 59 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 LRRD1A4D1F6 860 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 SRRM4A7MD48 611 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 ZNF724A8MTY0 619 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 SRRM5B3KS81 715 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 NEDD8-MDP1E9PL57 170 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 TXNL1O43396 289 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 DUSP11O75319 330 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 CSO75390 466 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 CSDE1O75534 798 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 OR6B1O95007 311 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 OR6A2O95222 327 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 IGHG1P01857 330 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 MT-ND1P03886 318 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 FHP07954 510 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 NUDT17P0C025 328 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 OR9G9P0C7N8 305 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 ID1P41134 155 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 SERPINH1P50454 418 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 CCR4P51679 360 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 RPL27P61353 136 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 MFGE8Q08431 387 aaPredicted RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 HSPA14Q0VDF9 509 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 TEFQ10587 303 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 ITPK1Q13572 414 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 MEF2DQ14814 521 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 HEPACAMQ14CZ8 416 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 TMEM44Q2T9K0 475 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 EIPR1Q53HC9 387 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 DCAF12Q5T6F0 453 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 C9orf66Q5T8R8 295 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 C1orf189Q5VU69 101 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 AGAP7PQ5VUJ5 663 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 CD164L2Q6UWJ8 174 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 RAPH1Q70E73 1250 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 MARCH9Q86YJ5 346 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 LRRC49Q8IUZ0 686 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 ZNF781Q8N8C0 355 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 LPCAT1Q8NF37 534 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 PSMA8Q8TAA3 256 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 PRCCQ92733 491 aaPredicted RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 HAS2Q92819 552 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 ESAMQ96AP7 390 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 CFAP36Q96G28 342 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 PCED1BQ96HM7 432 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 LINC00167Q96N53 147 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 GUCD1Q96NT3 240 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 DESI2Q9BSY9 194 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 NUSAP1Q9BXS6 441 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 ZDHHC6Q9H6R6 413 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 EIF3KQ9UBQ5 218 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 SPATA2Q9UM82 520 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 NOL7Q9UMY1 257 aaKnown RBP2.38□□□□□ -2.03
DENND4A-205ENST00000562540 CPQQ9Y646 472 aa2.38□□□□□ -2.03
DENND4A-205ENST00000562540 TEX48A0A1B0GUV7 120 aa2.37□□□□□ -2.03
DENND4A-205ENST00000562540 E9PAM4 449 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms