RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 RAF1P04049 648 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FGF1P05230 155 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 INHBAP08476 426 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAM90A15PP0C7V4 464 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAM90A14PP0C7W9 464 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 SLC2A3P11169 496 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CNTFP26441 200 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 ADORA2BP29275 332 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 GRK5P34947 590 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 SERPINB6P35237 376 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 RPL22P35268 128 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 GJC1P36383 396 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FDFT1P37268 417 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 HADHAP40939 763 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 MSH2P43246 934 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 TSFMP43897 325 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 MAPK9P45984 424 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 ATP5OP48047 213 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 SERPINB9P50453 376 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 TDGF1P3P51864 188 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 RPL15P61313 204 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 RPS24P62847 133 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 OGDHQ02218 1023 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PDIA2Q13087 525 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 GAB1Q13480 694 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 NAB1Q13506 487 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CDH18Q13634 790 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 SNTB1Q13884 538 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 PRPSAP1Q14558 356 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 KPNB1Q14974 876 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 PARP6Q2NL67 630 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 GALNTL6Q49A17 601 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 C2CD6Q53TS8 623 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 ANKRD20A8PQ5CZ79 823 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 RNASEH2BQ5TBB1 312 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 SHEQ5VZ18 495 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FCRLBQ6BAA4 426 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 AADACL2Q6P093 401 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PMF1Q6P1K2 205 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 RANBP10Q6VN20 620 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 RGS9BPQ6ZS82 235 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CCDC121Q6ZUS5 278 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAM183BPQ6ZVS7 135 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PIGWQ7Z7B1 504 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PIGZQ86VD9 579 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 MOGAT3Q86VF5 341 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CDC20BQ86Y33 519 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 GALNT4Q8N4A0 578 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 ZBTB2Q8N680 514 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 C12orf29Q8N999 325 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CCDC197Q8NCU1 140 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CATSPER1Q8NEC5 780 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 JOSD2Q8TAC2 188 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 GABPB2Q8TAK5 448 aaPredicted RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 SLC2A14Q8TDB8 520 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAM172AQ8WUF8 416 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 TFB1MQ8WVM0 346 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 PATE1Q8WXA2 126 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CPT1BQ92523 772 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 HSPH1Q92598 858 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 RSC1A1Q92681 617 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CDKL2Q92772 493 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 MR1Q95460 341 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 NT5C3BQ969T7 300 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 NTAN1Q96AB6 310 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAF2Q96CS3 445 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PGAP3Q96FM1 320 aaPredicted RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 RITA1Q96K30 269 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CABS1Q96KC9 395 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 MAGEB18Q96M61 343 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 TWNKQ96RR1 684 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 WDR77Q9BQA1 342 aaPredicted RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 SDCBP2Q9H190 292 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CDC42EP4Q9H3Q1 356 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 PRDM13Q9H4Q3 707 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CDCP1Q9H5V8 836 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 RETREG1Q9H6L5 497 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 VPS37BQ9H9H4 285 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 CHODLQ9H9P2 273 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 KCNK9Q9NPC2 374 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PPANQ9NQ55 473 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 EIF2B3Q9NR50 452 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 NINJ2Q9NZG7 142 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 IL17CQ9P0M4 197 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PDP2Q9P2J9 529 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PSMC3IPQ9P2W1 217 aaPredicted RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 RNF7Q9UBF6 113 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 KLQ9UEF7 1012 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PCSK1NQ9UHG2 260 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 SLC25A13Q9UJS0 675 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 BAG5Q9UL15 447 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 R3HDM2Q9Y2K5 976 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 MEMO1Q9Y316 297 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FADS3Q9Y5Q0 445 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 ANK3Q12955 4377 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 PIKFYVEQ9Y2I7 2098 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 KMT2CQ8NEZ4 4911 aaKnown RBP3.04□□□□□ -1.92
SPG11-225ENST00000561391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.04□□□□□ -1.92
SPG11-225ENST00000561391 CACNA1CQ13936 2221 aa3.04□□□□□ -1.92
SPG11-225ENST00000561391 LRP4O75096 1905 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms