RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SOX18P35713 384 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.33
TPM1-230ENST00000561266 ZNF33BQ06732 778 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 CSTF3Q12996 717 aaKnown RBP12.96□□□□□ -0.33
TPM1-230ENST00000561266 UGT3A2Q3SY77 523 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 ARL13AQ5H913 290 aaPredicted RBP12.96□□□□□ -0.33
TPM1-230ENST00000561266 ACER2Q5QJU3 275 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 C10orf62Q5T681 223 aaPredicted RBP12.96□□□□□ -0.33
TPM1-230ENST00000561266 FAM180BQ6P0A1 224 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 ZADH2Q8N4Q0 377 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 B3GNT7Q8NFL0 401 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 OR2T11Q8NH01 316 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 THAP3Q8WTV1 239 aaPredicted RBP12.96□□□□□ -0.33
TPM1-230ENST00000561266 PNPLA2Q96AD5 504 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 PGM2Q96G03 612 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 CNDP1Q96KN2 507 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 CENPKQ9BS16 269 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 C20orf27Q9GZN8 174 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 ANKRD10Q9NXR5 420 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 STMN3Q9NZ72 180 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 PHF11Q9UIL8 331 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 CES1P1Q9UKY3 287 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 G3BP2Q9UN86 482 aaKnown RBP12.96□□□□□ -0.33
TPM1-230ENST00000561266 B3GNT3Q9Y2A9 372 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 FIS1Q9Y3D6 152 aa12.96□□□□□ -0.33
TPM1-230ENST00000561266 SVILO95425 2214 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 TRBV11-1A0A0K0K1C0 115 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 ITM2AO43736 263 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 NPHS1O60500 1241 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 ZNF354AO60765 605 aaPredicted RBP12.95□□□□□ -0.34
TPM1-230ENST00000561266 LYPLA1O75608 230 aaPredicted RBP12.95□□□□□ -0.34
TPM1-230ENST00000561266 GPR75O95800 540 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 NR2F6P10588 404 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 HSD3B1P14060 373 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 HSD3B2P26439 372 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 SERPINB4P48594 390 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 STX4Q12846 297 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 CASP8Q14790 479 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 ELAVL1Q15717 326 aaKnown RBP12.95□□□□□ -0.34
TPM1-230ENST00000561266 NDUFAF5Q5TEU4 345 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 IRAK1BP1Q5VVH5 260 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 Q6ZSR9 355 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 ZNF227Q86WZ6 799 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 CISD2Q8N5K1 135 aaKnown RBP12.95□□□□□ -0.34
TPM1-230ENST00000561266 ZNF721Q8TF20 911 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 HAS2Q92819 552 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 TANKQ92844 425 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 TLCD1Q96CP7 247 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 EBPLQ9BY08 206 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 HES7Q9BYE0 225 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 TMBIM4Q9HC24 238 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 SSU72Q9NP77 194 aaKnown RBP12.95□□□□□ -0.34
TPM1-230ENST00000561266 MS4A12Q9NXJ0 267 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 SENP1Q9P0U3 644 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 MID2Q9UJV3 735 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 STK38LQ9Y2H1 464 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 PCDHGA10Q9Y5H3 936 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 PCDHA9Q9Y5H5 950 aa12.95□□□□□ -0.34
TPM1-230ENST00000561266 C17orf105B2RV13 164 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 AZIN1O14977 448 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 ERLIN1O75477 346 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 WISP2O76076 250 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 CLPSP04118 112 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 CT62P0C5K7 136 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 UROSP10746 265 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 CD96P40200 585 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 STT3AP46977 705 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 TNFSF10P50591 281 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 MAPK12P53778 367 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 WDR4P57081 412 aaKnown RBP12.94□□□□□ -0.34
TPM1-230ENST00000561266 MLF1P58340 268 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 RCN2Q14257 317 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 KIAA0040Q15053 153 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 TERF2Q15554 542 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 INPP5JQ15735 1006 aaPredicted RBP12.94□□□□□ -0.34
TPM1-230ENST00000561266 KANK2Q63ZY3 851 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 TRIM46Q7Z4K8 759 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 RPS19BP1Q86WX3 136 aaKnown RBP12.94□□□□□ -0.34
TPM1-230ENST00000561266 HPS6Q86YV9 775 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 AGR3Q8TD06 166 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 SLC2A12Q8TD20 617 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 MIB2Q96AX9 1013 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 ARL8AQ96BM9 186 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 SNRNP40Q96DI7 357 aaKnown RBP12.94□□□□□ -0.34
TPM1-230ENST00000561266 EPS8L2Q9H6S3 715 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 AHSPQ9NZD4 102 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 GIMAP2Q9UG22 337 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 ZDHHC2Q9UIJ5 367 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 EXO1Q9UQ84 846 aaKnown RBP12.94□□□□□ -0.34
TPM1-230ENST00000561266 DNAJC15Q9Y5T4 150 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 SPACA6W5XKT8 324 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 TENM4Q6N022 2769 aa12.94□□□□□ -0.34
TPM1-230ENST00000561266 TTLL8A6PVC2 850 aa12.93□□□□□ -0.34
TPM1-230ENST00000561266 PCDH7O60245 1069 aa12.93□□□□□ -0.34
TPM1-230ENST00000561266 KLHL41O60662 606 aa12.93□□□□□ -0.34
TPM1-230ENST00000561266 IGKV3-11P04433 115 aa12.93□□□□□ -0.34
TPM1-230ENST00000561266 IL3P08700 152 aa12.93□□□□□ -0.34
TPM1-230ENST00000561266 LINC00032P0C843 101 aa12.93□□□□□ -0.34
TPM1-230ENST00000561266 ALOX15P16050 662 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms