RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 OR2AG2A6NM03 316 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 FAM170BA6NMN3 283 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 LOC110117498-PIK3R3F6TDL0 507 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 F8W036 122 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SLCO1B7G3V0H7 640 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 GRID2O43424 1007 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 PAGE4O60829 102 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 GPIP06744 558 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 GALTP07902 379 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TAL1P17542 331 aaPredicted RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 RAB3AP20336 220 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TUBG1P23258 451 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 ETV6P41212 452 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 KIAA1024LP59773 190 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SSTP61278 116 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 PDK2Q15119 407 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 PGM5Q15124 567 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 AANATQ16613 207 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 AAK1Q2M2I8 961 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 Q3ZCU0 254 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 C1orf220Q5T0J3 134 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SYT6Q5T7P8 510 aaPredicted RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 WBP2NLQ6ICG8 309 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 LCN8Q6JVE9 175 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TEX38Q6PEX7 206 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TRMT10BQ6PF06 316 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CFAP77Q6ZQR2 320 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SPPL2CQ8IUH8 684 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 FEZF2Q8TBJ5 459 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 ZCCHC10Q8TBK6 192 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SMG7Q92540 1137 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CNOT9Q92600 299 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TEPSINQ96N21 525 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC46A1Q96NT5 459 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 OR2A14Q96R47 310 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 MLPHQ9BV36 600 aaPredicted RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF416Q9BWM5 594 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 DCSTAMPQ9H295 470 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 RHBGQ9H310 441 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CATSPERBQ9H7T0 1116 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CARS2Q9HA77 564 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TUBG2Q9NRH3 451 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 C20orf141Q9NUB4 165 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 COX16Q9P0S2 106 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CYB5R1Q9UHQ9 305 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 PNMA8CA0A1B0GUJ8 204 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 ATP6AP2A0A1C7CYW4 349 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 A0A1W2PQM1 296 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 A0A1W2PR48 441 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CIB4A0PJX0 185 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CDHR4A6H8M9 788 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 MFSD2BA6NFX1 497 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC15A5A6NIM6 579 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 EFCAB9A8MZ26 197 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 KDM4EB2RXH2 506 aaPredicted RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TEX22C9J3V5 150 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 E5RI56 91 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 H3BS24 57 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SSX5O60225 188 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TRIM13O60858 407 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 LRCH4O75427 683 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SRP72O76094 671 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CNTN5O94779 1100 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 C2P06681 752 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 S100A9P06702 114 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 LIPFP07098 398 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 ACHEP22303 614 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CYP2F1P24903 491 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TYK2P29597 1187 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 OXTRP30559 389 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 RFX2P48378 723 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SLC7A2P52569 658 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SNRPD2P62316 118 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 CNTN2Q02246 1040 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 BTN1A1Q13410 526 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 ZXDCQ2QGD7 858 aaPredicted RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 GAB4Q2WGN9 574 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TTC23Q5W5X9 447 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 LAMTOR1Q6IAA8 161 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TBPL2Q6SJ96 375 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 LIPIQ6XZB0 460 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 ZNF720Q7Z2F6 126 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 TMPRSS9Q7Z410 1059 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 MRPL10Q7Z7H8 261 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 ADGRG3Q86Y34 549 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 BCL2L2Q92843 193 aaPredicted RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 FAF2Q96CS3 445 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 AURKBQ96GD4 344 aaPredicted RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SIGLEC10Q96LC7 697 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 HSD17B14Q9BPX1 270 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 GTPBP2Q9BX10 602 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 BEX2Q9BXY8 128 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 KAT8Q9H7Z6 458 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 RPF1Q9H9Y2 349 aaKnown RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 DPP3Q9NY33 737 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 RBAKQ9NYW8 714 aaPredicted RBP6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 EXTL2Q9UBQ6 330 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 SCML1Q9UN30 329 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 GMPPBQ9Y5P6 360 aa6.42□□□□□ -1.38
TSPAN3-209ENST00000560715 PRR23AA6NEV1 266 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms