RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 LACC1Q8IV20 430 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 P3H2Q8IVL5 708 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 LRRC25Q8N386 305 aaPredicted RBP9.12□□□□□ -0.95
TPM1-225ENST00000560679 FAM47BQ8NA70 645 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 LRRC46Q96FV0 321 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 SNF8Q96H20 258 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 SGCZQ96LD1 299 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 DOCK7Q96N67 2140 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 CSF3RQ99062 836 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 YIPF4Q9BSR8 244 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 PROK2Q9HC23 129 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 PRTFDC1Q9NRG1 225 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 BFARQ9NZS9 450 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 JKAMPQ9P055 326 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 ASIC3Q9UHC3 531 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 ZNF148Q9UQR1 794 aa9.12□□□□□ -0.95
TPM1-225ENST00000560679 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.12□□□□□ -0.95
TPM1-225ENST00000560679 A0A0G2JN53 185 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 MYOCOSA0A1B0GUC4 107 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 EEF1E1-BLOC1S5C9J1V9 151 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 EIF3FO00303 357 aaPredicted RBP9.11□□□□□ -0.95
TPM1-225ENST00000560679 SIAH2O43255 324 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 EEF1E1O43324 174 aaKnown RBP9.11□□□□□ -0.95
TPM1-225ENST00000560679 SMPD2O60906 423 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 AVILO75366 819 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 KRT14P02533 472 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 P04436 131 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 TRPC1P48995 793 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 HSD17B7P56937 341 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 RNF4P78317 190 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 CRYZQ08257 329 aaKnown RBP9.11□□□□□ -0.95
TPM1-225ENST00000560679 SP140Q13342 867 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 KRT71Q3SY84 523 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 TOR1AIP1Q5JTV8 583 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 PRAMEF20Q5VT98 475 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 PRSS57Q6UWY2 283 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 LYPD8Q6UX82 237 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 CAPN12Q6ZSI9 719 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 BBOF1Q8ND07 529 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 OR56A3Q8NH54 315 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 OR2W6PQ8NHA6 318 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 PPP1R14CQ8TAE6 165 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 PTPMT1Q8WUK0 201 aaPredicted RBP9.11□□□□□ -0.95
TPM1-225ENST00000560679 EEF1AKMT1Q8WVE0 214 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 SMPDL3BQ92485 455 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 NEIL2Q969S2 332 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 TSNARE1Q96NA8 513 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 PIP5K1AQ99755 562 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 HAUS8Q9BT25 410 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 BDH2Q9BUT1 245 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 FRMD8P1Q9BZ68 369 aaPredicted RBP9.11□□□□□ -0.95
TPM1-225ENST00000560679 TSPYL1Q9H0U9 437 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 EPB41L4BQ9H329 900 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 PARVBQ9HBI1 364 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 ACKR4Q9NPB9 350 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 FREM3P0C091 2139 aa9.11□□□□□ -0.95
TPM1-225ENST00000560679 RNF212BA8MTL3 300 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 CRLF1O75462 422 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 LRATO95237 230 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 C8GP07360 202 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 IVDP26440 423 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 HNRNPH1P31943 449 aaKnown RBP9.1□□□□□ -0.95
TPM1-225ENST00000560679 RAB38P57729 211 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 BASP1P80723 227 aaKnown RBP9.1□□□□□ -0.95
TPM1-225ENST00000560679 IFFO1Q0D2I5 559 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 BMPR2Q13873 1038 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 ZNF791Q3KP31 576 aaPredicted RBP9.1□□□□□ -0.95
TPM1-225ENST00000560679 DCST1Q5T197 706 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 UGT3A1Q6NUS8 523 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 OPN5Q6U736 354 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 TRMT10CQ7L0Y3 403 aaKnown RBP9.1□□□□□ -0.95
TPM1-225ENST00000560679 CROCCP2Q86T23 111 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 TMEM132CQ8N3T6 1108 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 ARFGAP2Q8N6H7 521 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 CCDC89Q8N998 374 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 OR8K3Q8NH51 312 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 SLC2A12Q8TD20 617 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 SLC5A11Q8WWX8 675 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 PERPQ96FX8 193 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 DACH2Q96NX9 599 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 TMEM109Q9BVC6 243 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 CAPS2Q9BXY5 557 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 OR8D2Q9GZM6 311 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 PRDM14Q9GZV8 571 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 ZFP64Q9NPA5 681 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 GALNT8Q9NY28 637 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 NPFFR2Q9Y5X5 522 aa9.1□□□□□ -0.95
TPM1-225ENST00000560679 C15orf38-AP3S2A0A0A6YYH1 394 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 ZCWPW2A0A1B0GU75 182 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 SH3D21A4FU49 640 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 MBD3L4A6NDZ8 208 aaPredicted RBP9.09□□□□□ -0.95
TPM1-225ENST00000560679 MBD3L3A6NE82 208 aaPredicted RBP9.09□□□□□ -0.95
TPM1-225ENST00000560679 ERICH4A6NGS2 130 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 MBD3L5A6NJ08 208 aaPredicted RBP9.09□□□□□ -0.95
TPM1-225ENST00000560679 AHRRA9YTQ3 701 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 CYR61O00622 381 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 TBX6O95947 436 aaPredicted RBP9.09□□□□□ -0.95
TPM1-225ENST00000560679 IL2RAP01589 272 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 SERPINA6P08185 405 aa9.09□□□□□ -0.95
TPM1-225ENST00000560679 PAMP19021 973 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms