RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 NUP210LQ5VU65 1888 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 ANKRD11Q6UB99 2663 aaPredicted RBP13.48□□□□□ -0.25
SMAD6-204ENST00000559931 SRRM3A6NNA2 597 aaPredicted RBP13.48□□□□□ -0.25
SMAD6-204ENST00000559931 SNX3O60493 162 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 KLF7O75840 302 aaPredicted RBP13.48□□□□□ -0.25
SMAD6-204ENST00000559931 GPR75O95800 540 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 IGHEP01854 428 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 CAPNS1P04632 268 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 IFNA16P05015 189 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 C8orf89P0DMQ9 161 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 COX7A2P14406 83 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 PCSK2P16519 638 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 DDX5P17844 614 aaKnown RBP13.48□□□□□ -0.25
SMAD6-204ENST00000559931 DDCP20711 480 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 OTX2P32243 289 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 RPL3P39023 403 aaKnown RBP13.48□□□□□ -0.25
SMAD6-204ENST00000559931 CLDN8P56748 225 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 FOLH1Q04609 750 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 SSPNQ14714 243 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 PGS1Q32NB8 556 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 METTL21CQ5VZV1 264 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 ANKRD26P1Q6NSI1 321 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 SLC48A1Q6P1K1 146 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 TICAM1Q8IUC6 712 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 MIER2Q8N344 545 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 KRTCAP2Q8N6L1 136 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 PLPP5Q8NEB5 264 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 SNIP1Q8TAD8 396 aaKnown RBP13.48□□□□□ -0.25
SMAD6-204ENST00000559931 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMAD6-204ENST00000559931 C10orf82Q8WW14 230 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 STON2Q8WXE9 905 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 PPCDCQ96CD2 204 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 KLHL29Q96CT2 875 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 ALOXE3Q9BYJ1 711 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 SEMA3GQ9NS98 782 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 MAPRE3Q9UPY8 281 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 GPR45Q9Y5Y3 372 aa13.48□□□□□ -0.25
SMAD6-204ENST00000559931 GABRR3A8MPY1 467 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 FGF17O60258 216 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 ALOX12BO75342 701 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 CREG1O75629 220 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 SLC22A3O75751 556 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 RECKO95980 971 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 FAM107AO95990 144 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 TNNI3P19429 210 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 XKP51811 444 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 UFM1P61960 85 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 RHAGQ02094 409 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 CPTPQ5TA50 214 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 LRRC69Q6ZNQ3 347 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 QSOX2Q6ZRP7 698 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 TMEM151BQ8IW70 566 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 DNAJB14Q8TBM8 379 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 STARD8Q92502 1023 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 TSLPQ969D9 159 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 ANKRD9Q96BM1 317 aaPredicted RBP13.47□□□□□ -0.25
SMAD6-204ENST00000559931 RBM18Q96H35 190 aaKnown RBP13.47□□□□□ -0.25
SMAD6-204ENST00000559931 BBS4Q96RK4 519 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 CCNL2Q96S94 520 aaPredicted RBP13.47□□□□□ -0.25
SMAD6-204ENST00000559931 NECTIN3Q9NQS3 549 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 PNO1Q9NRX1 252 aaKnown RBP13.47□□□□□ -0.25
SMAD6-204ENST00000559931 ENTPD4Q9Y227 616 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 RAXQ9Y2V3 346 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 PCDHGA6Q9Y5G7 932 aa13.47□□□□□ -0.25
SMAD6-204ENST00000559931 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 A8MUA0 341 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 TAF4O00268 1085 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 TERTO14746 1132 aaKnown RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 SCAMP2O15127 329 aaKnown RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 OR10H2O60403 315 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 UMODP07911 640 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 FURINP09958 794 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 CSNK2A2P19784 350 aaPredicted RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 FEN1P39748 380 aaKnown RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 CLNS1AP54105 237 aaKnown RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 OR4D2P58180 307 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 SRSF6Q13247 344 aaKnown RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 BIKQ13323 160 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 SERTAD2Q14140 314 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 SQLEQ14534 574 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 GKAP1Q5VSY0 366 aaPredicted RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 BROXQ5VW32 411 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 FAM180BQ6P0A1 224 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 MED25Q71SY5 747 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 PIGWQ7Z7B1 504 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 RAB43Q86YS6 212 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 KDF1Q8NAX2 398 aaPredicted RBP13.46□□□□□ -0.25
SMAD6-204ENST00000559931 ZSCAN1Q8NBB4 408 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 C7orf57Q8NEG2 295 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 OR7A2PQ8NGA2 310 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 MTERF3Q96E29 417 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 VPS50Q96JG6 964 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 SLC45A3Q96JT2 553 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 DGAT2Q96PD7 388 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 BRINP2Q9C0B6 783 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 SLC35C2Q9NQQ7 365 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 ATAD3AQ9NVI7 634 aa13.46□□□□□ -0.25
SMAD6-204ENST00000559931 EHD3Q9NZN3 535 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms