RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ENDOUP21128 410 aaKnown RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 ZNF10P21506 573 aaPredicted RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 CPN2P22792 545 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 CASQ1P31415 396 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 STX2P32856 288 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 PTGER4P35408 488 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 BSGP35613 385 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 MAGEA5P43359 124 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 NEK2P51955 445 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 SMSP52788 366 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 ETF1P62495 437 aaKnown RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 PPIAP62937 165 aaKnown RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 FOLH1Q04609 750 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 TFF3Q07654 80 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 ASPHQ12797 758 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 STX4Q12846 297 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 SLAMF1Q13291 335 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 TECRLQ5HYJ1 363 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 PAGE2BQ5JRK9 111 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 OR4C11Q6IEV9 310 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 MRM1Q6IN84 353 aaKnown RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 RPS27LQ71UM5 84 aaKnown RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 GDF7Q7Z4P5 450 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 GOLGA7Q7Z5G4 137 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 TBC1D1Q86TI0 1168 aaPredicted RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 CCDC71Q8IV32 467 aaPredicted RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 TMEM251Q8N6I4 163 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 NSUN5Q96P11 429 aaKnown RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 CDK15Q96Q40 435 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 TREX2Q9BQ50 279 aaPredicted RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 CCDC77Q9BR77 488 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 UCK2Q9BZX2 261 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 NMRAL1Q9HBL8 299 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 PROK2Q9HC23 129 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 CHST11Q9NPF2 352 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 TIMMDC1Q9NPL8 285 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 PNPLA3Q9NST1 481 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 RNF6Q9Y252 685 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 RNF11Q9Y3C5 154 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 ASB4Q9Y574 426 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 A0A0A6YYD5 115 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 A0A1W2PR48 441 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 OR7A17O14581 309 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 GBAP04062 536 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 RFPL3SP0C7P2 107 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 TNNI3P19429 210 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 CRABP2P29373 138 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 PIGAP37287 484 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 STT3AP46977 705 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 NUP107P57740 925 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 TNFRSF17Q02223 184 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 HIST2H2ACQ16777 129 aaPredicted RBP12.52□□□□□ -0.41
VPS18-203ENST00000558855 PFKFB4Q16877 469 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 TMEM35AQ53FP2 167 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 HIST2H2AA3Q6FI13 130 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 RTL6Q6ICC9 239 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 MYLK4Q86YV6 388 aaPredicted RBP12.52□□□□□ -0.41
VPS18-203ENST00000558855 OR5M9Q8NGP3 310 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 WDR20Q8TBZ3 569 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 DAZLQ92904 295 aaKnown RBP12.52□□□□□ -0.41
VPS18-203ENST00000558855 CMTM7Q96FZ5 175 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 SENP5Q96HI0 755 aaPredicted RBP12.52□□□□□ -0.41
VPS18-203ENST00000558855 ENKD1Q9H0I2 346 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 SH2D2AQ9NP31 389 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 ACOT9Q9Y305 439 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 FAM215AQ9Y5M1 114 aa12.52□□□□□ -0.41
VPS18-203ENST00000558855 HRNRQ86YZ3 2850 aaPredicted RBP12.52□□□□□ -0.41
VPS18-203ENST00000558855 A0A096LPK6 155 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 LRRC3CA6NJW4 275 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 FAM90A27PA6NNH2 459 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 KDM4EB2RXH2 506 aaPredicted RBP12.51□□□□□ -0.41
VPS18-203ENST00000558855 NPIPA2E9PIF3 369 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 NPIPA3F8WFD2 350 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 EPB42P16452 691 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 IGFBP2P18065 325 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 ECHS1P30084 290 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 HERVK_113P63132 956 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 ERVK-8P63133 956 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 PLGLB1Q02325 96 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 CAV1Q03135 178 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 ILF2Q12905 390 aaKnown RBP12.51□□□□□ -0.41
VPS18-203ENST00000558855 NAB1Q13506 487 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 SERTAD2Q14140 314 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 UAP1Q16222 522 aaPredicted RBP12.51□□□□□ -0.41
VPS18-203ENST00000558855 AP5B1Q2VPB7 878 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 ZNF791Q3KP31 576 aaPredicted RBP12.51□□□□□ -0.41
VPS18-203ENST00000558855 PIGGQ5H8A4 983 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 TMEM64Q6YI46 380 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 RTL4Q6ZR62 310 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 OR52B6Q8NGF0 335 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 CNPPD1Q9BV87 410 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 ERVK-6Q9BXR3 956 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 RPF2Q9H7B2 306 aaKnown RBP12.51□□□□□ -0.41
VPS18-203ENST00000558855 ZBTB26Q9HCK0 441 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 TEX10Q9NXF1 929 aaPredicted RBP12.51□□□□□ -0.41
VPS18-203ENST00000558855 CPSF2Q9P2I0 782 aaKnown RBP12.51□□□□□ -0.41
VPS18-203ENST00000558855 SPRR3Q9UBC9 169 aa12.51□□□□□ -0.41
VPS18-203ENST00000558855 DMGDHQ9UI17 866 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms