RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 HSD17B2P37059 387 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 DUSP2Q05923 314 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 MAD2L1BPQ15013 274 aaPredicted RBP10.08□□□□□ -0.8
CUX1-217ENST00000558836 GPR19Q15760 415 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 LEXMQ3ZCV2 418 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 ANKDD1AQ495B1 522 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 ZNF542PQ5EBM4 170 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 KIAA1161Q6NSJ0 714 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 RAB42Q8N4Z0 105 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 KCT2Q8NC54 265 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 OR2L3Q8NG85 312 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 FAM81AQ8TBF8 368 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 APH1BQ8WW43 257 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 OR1E3Q8WZA6 343 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 TANKQ92844 425 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 CDCA3Q99618 268 aaPredicted RBP10.08□□□□□ -0.8
CUX1-217ENST00000558836 EPYCQ99645 322 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 APOL4Q9BPW4 351 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 TMEM168Q9H0V1 697 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 GLIPR2Q9H4G4 154 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 EPS8L2Q9H6S3 715 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 PCDHGA6Q9Y5G7 932 aa10.08□□□□□ -0.8
CUX1-217ENST00000558836 DNMT3AQ9Y6K1 912 aaPredicted RBP10.08□□□□□ -0.8
CUX1-217ENST00000558836 PRSS38A1L453 326 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 PRAMEF27A3QJZ7 478 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 BTN3A3O00478 584 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 HMGN4O00479 90 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 FFAR1O14842 300 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 SEMA7AO75326 666 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 CCNA2P20248 432 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 POU1F1P28069 291 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 C21orf33P30042 268 aaPredicted RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 NCBP2P52298 156 aaKnown RBP eCLIP10.07□□□□□ -0.8
CUX1-217ENST00000558836 LIM2P55344 173 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 PCBP4P57723 403 aaKnown RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 HYAL2Q12891 473 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 AQP6Q13520 282 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 SPCS2Q15005 226 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 ZNF630Q2M218 657 aaPredicted RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 REEP3Q6NUK4 255 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 FAR1Q8WVX9 515 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 DNASE1L2Q92874 299 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 TBC1D20Q96BZ9 403 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 PCBD2Q9H0N5 130 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 QRSL1Q9H0R6 528 aaKnown RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 ACER3Q9NUN7 267 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 ANGPT4Q9Y264 503 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 FAM32AQ9Y421 112 aaKnown RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 PCDHGA10Q9Y5H3 936 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 A0A1W2PR48 441 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 ANHXE9PGG2 379 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 ADAMDEC1O15204 470 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 NOL3O60936 208 aaKnown RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 SEMA3DO95025 777 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 MT-ND2P03891 347 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 IGFBP1P08833 259 aaPredicted RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 PSMB9P28065 219 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 PKLRP30613 574 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 TGFBR1P36897 503 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 TNFRSF4P43489 277 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 MASP1P48740 699 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 PCBP3P57721 371 aaKnown RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 NFATC3Q12968 1075 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 KEAP1Q14145 624 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 MAPK11Q15759 364 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 CRB2Q5IJ48 1285 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 TSPYL5Q86VY4 417 aaPredicted RBP10.07□□□□□ -0.8
CUX1-217ENST00000558836 SETD9Q8NE22 299 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 LCN9Q8WX39 176 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 PATE1Q8WXA2 126 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 OR5P2Q8WZ92 322 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 PROX1Q92786 737 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 NRBF2Q96F24 287 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 MRGPRX1Q96LB2 322 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 EQTNQ9NQ60 294 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 SPATA7Q9P0W8 599 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.07□□□□□ -0.84e-11■■■■■ 28.6
CUX1-217ENST00000558836 RNF6Q9Y252 685 aa10.07□□□□□ -0.8
CUX1-217ENST00000558836 TOR1BO14657 336 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 SLC28A2O43868 658 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 GADD45GO95257 159 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 RASGRP1O95267 797 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 GASTP01350 101 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 TFPTP0C1Z6 253 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 CCDC159P0C7I6 412 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 GRK3P35626 688 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 ACTR1BP42025 376 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 MLLT10P55197 1068 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 NUP107P57740 925 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 ACTR1AP61163 376 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 SLC35A2P78381 396 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.87e-6■■■■□ 19.8
CUX1-217ENST00000558836 DMPKQ09013 629 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 RBBP4Q09028 425 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 ADAM15Q13444 863 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 AGERQ15109 404 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 SAXO2Q658L1 398 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 KLHL17Q6TDP4 642 aa10.06□□□□□ -0.8
CUX1-217ENST00000558836 DEF8Q6ZN54 512 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms