RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NEURL3Q96EH8 262 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 BDH2Q9BUT1 245 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 OSBPL11Q9BXB4 747 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 ACSS1Q9NUB1 689 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 VNN3Q9NY84 501 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 ANKMY1Q9P2S6 941 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 DNAJB9Q9UBS3 223 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 SAMD4AQ9UPU9 718 aaKnown RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 ENTPD2Q9Y5L3 495 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 CCDC88CQ9P219 2028 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 LOC105369274A0A096LPK9 316 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 LOC102723532A0A0G2JNH3 316 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 A0A1W2PS29 197 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 PGRMC2O15173 223 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 MAZP56270 477 aaKnown RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 HHEXQ03014 270 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 VAC14Q08AM6 782 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 SPEM2Q0P670 501 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 SLC9A5Q14940 896 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 FRMPD2BQ6IN97 320 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 RNF44Q7L0R7 432 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 EIF3MQ7L2H7 374 aaKnown RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 TMEM179BQ7Z7N9 219 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 OR4N4Q8N0Y3 316 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 C11orf65Q8NCR3 313 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 SUN3Q8TAQ9 357 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 BAHD1Q8TBE0 780 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 SAP25Q8TEE9 199 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 POP5Q969H6 163 aaKnown RBP12.25□□□□□ -0.45
SMAD3-207ENST00000558763 VPS50Q96JG6 964 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 TRAPPC9Q96Q05 1148 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 KLHL25Q9H0H3 589 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 GLIPR2Q9H4G4 154 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 SERHL2Q9H4I8 314 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 NEUROD4Q9HD90 331 aa12.25□□□□□ -0.45
SMAD3-207ENST00000558763 RNF103-CHMP3A0A140T963 221 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 OR5K3A6NET4 321 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 A6NHS1 94 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 GLOD5A6NK44 160 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 C2orf74A8MZ97 194 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 HCRTR1O43613 425 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 GIMD1P0DJR0 217 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 CRATP43155 626 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 PCBP3P57721 371 aaKnown RBP12.24□□□□□ -0.45
SMAD3-207ENST00000558763 STXBP1P61764 594 aaKnown RBP12.24□□□□□ -0.45
SMAD3-207ENST00000558763 VLDLRP98155 873 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 MYBPC1Q00872 1141 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 GCNT6Q5T4J0 391 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 C18orf63Q68DL7 685 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 OR52E8Q6IFG1 317 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 TSEN54Q7Z6J9 526 aaKnown RBP12.24□□□□□ -0.45
SMAD3-207ENST00000558763 C17orf82Q86X59 251 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-207ENST00000558763 SDR16C5Q8N3Y7 309 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 CNRIP1Q96F85 164 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-207ENST00000558763 HSH2DQ96JZ2 352 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 AMDHD1Q96NU7 426 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 ANKRD60Q9BZ19 345 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 IL1RAPQ9NPH3 570 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 SLC35C2Q9NQQ7 365 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 C8orf4Q9NR00 106 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 BATF3Q9NR55 127 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 HRASLS2Q9NWW9 162 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 NCDNQ9UBB6 729 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 FAF1Q9UNN5 650 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-207ENST00000558763 ABCG2Q9UNQ0 655 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 MAP4K5Q9Y4K4 846 aa12.24□□□□□ -0.45
SMAD3-207ENST00000558763 ARID1BQ8NFD5 2236 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-207ENST00000558763 A0A0J9YVX5 310 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 A0A0J9YY10 115 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 YKT6O15498 198 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 PROM1O43490 865 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 NOBOXO60393 691 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMAD3-207ENST00000558763 FKBP9O95302 570 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 ZNF682O95780 498 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 ALPLP05186 524 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 ZNF888P0CJ79 500 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-207ENST00000558763 ARAFP10398 606 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 ZNF23P17027 643 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 SOAT1P35610 550 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 NBL1P41271 181 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 FASLGP48023 281 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 CHN2P52757 468 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 MANFP55145 182 aaKnown RBP12.23□□□□□ -0.45
SMAD3-207ENST00000558763 RBBP4Q09028 425 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 HSPB3Q12988 150 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 BIRC2Q13490 618 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 CEBPEQ15744 281 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 MAPK11Q15759 364 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMAD3-207ENST00000558763 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 TMEM154Q6P9G4 183 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 CCDC80Q76M96 950 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 KANSL1Q7Z3B3 1105 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 RBM12BQ8IXT5 1001 aaKnown RBP12.23□□□□□ -0.45
SMAD3-207ENST00000558763 HS3ST5Q8IZT8 346 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 SHISA5Q8N114 240 aa12.23□□□□□ -0.45
SMAD3-207ENST00000558763 SRFBP1Q8NEF9 429 aaKnown RBP12.23□□□□□ -0.45
SMAD3-207ENST00000558763 ZBED6CLQ96FA7 236 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms