RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 EFNA3P52797 238 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 PLTPP55058 493 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 TAS2R39P59534 338 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 CDK16Q00536 496 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 GUCY2DQ02846 1103 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 DLG1Q12959 904 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 CHAF1BQ13112 559 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 TRA2AQ13595 282 aaKnown RBP eCLIP4.04□□□□□ -1.76
SPG11-211ENST00000558561 LAMB3Q13751 1172 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 THOC5Q13769 683 aaKnown RBP4.04□□□□□ -1.76
SPG11-211ENST00000558561 CRYMQ14894 314 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 EFTUD2Q15029 972 aaKnown RBP eCLIP4.04□□□□□ -1.76
SPG11-211ENST00000558561 PHKG1Q16816 387 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 DEFB109BQ30KR1 87 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 MANEAQ5SRI9 462 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 ZNF362Q5T0B9 420 aaPredicted RBP4.04□□□□□ -1.76
SPG11-211ENST00000558561 DCAF12Q5T6F0 453 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 ZNF470Q6ECI4 717 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 FIGLAQ6QHK4 219 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 C4orf22Q6V702 233 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 NLRP9Q7RTR0 991 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 ZNF551Q7Z340 670 aaPredicted RBP4.04□□□□□ -1.76
SPG11-211ENST00000558561 PRSS42Q7Z5A4 293 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 SDCCAG8Q86SQ7 713 aaPredicted RBP4.04□□□□□ -1.76
SPG11-211ENST00000558561 KCNMB4Q86W47 210 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 TBC1D21Q8IYX1 336 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 METTL27Q8N6F8 245 aaPredicted RBP4.04□□□□□ -1.76
SPG11-211ENST00000558561 FBXO36Q8NEA4 188 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 OR2A1Q8NGT9 310 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 OR5K2Q8NHB8 316 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 FBXO25Q8TCJ0 367 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 CD200R1Q8TD46 325 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 CT55Q8WUE5 264 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 UBE2Q2Q8WVN8 375 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 SLCO2A1Q92959 643 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 KIAA1191Q96A73 305 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 ESAMQ96AP7 390 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 MOCOSQ96EN8 888 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 ZDHHC12Q96GR4 267 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 SGCZQ96LD1 299 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 PPP1R2P1Q96PQ5 205 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 CCNL2Q96S94 520 aaPredicted RBP4.04□□□□□ -1.76
SPG11-211ENST00000558561 C19orf43Q9BQ61 176 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 ERP44Q9BS26 406 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 RAB33BQ9H082 229 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 ATG10Q9H0Y0 220 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 SPNS1Q9H2V7 528 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 MVB12BQ9H7P6 319 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 CAB39LQ9H9S4 337 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 SAYSD1Q9NPB0 183 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 FGF21Q9NSA1 209 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 DHCR7Q9UBM7 475 aaKnown RBP4.04□□□□□ -1.76
SPG11-211ENST00000558561 CDC23Q9UJX2 597 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 TLK1Q9UKI8 766 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 POMT2Q9UKY4 750 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 MAN2B2Q9Y2E5 1009 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 DHRS7Q9Y394 339 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 MRPS2Q9Y399 296 aaKnown RBP4.04□□□□□ -1.76
SPG11-211ENST00000558561 COLEC10Q9Y6Z7 277 aa4.04□□□□□ -1.76
SPG11-211ENST00000558561 CNTRLQ7Z7A1 2325 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 A0A0J9YVX5 310 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 AQP7P3A6NL99 342 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 CLCA1A8K7I4 914 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 TMEM150CB9EJG8 249 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 E7ESA3 106 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 GFYI3L273 518 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 IFRD1O00458 451 aaPredicted RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 RASGRF2O14827 1237 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ZNF749O43361 778 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PSIP1O75475 530 aaKnown RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 INMTO95050 263 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 NXPH3O95157 252 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 GAS8O95995 478 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 FTH1P02794 183 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 APOA4P06727 396 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ANKRD34CP0C6C1 535 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 LIPCP11150 499 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 SLC2A4P14672 509 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 OGNP20774 298 aaKnown RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 BMP5P22003 454 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PAFAH1B1P43034 410 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 OR1D4P47884 311 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 TTPAP49638 278 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 SARNPP82979 210 aaKnown RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 RPA4Q13156 261 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 EIF3IQ13347 325 aaKnown RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 TSTA3Q13630 321 aaPredicted RBP4.03□□□□□ -1.76
SPG11-211ENST00000558561 MORF4L2Q15014 288 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 SYT16Q17RD7 645 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 ERCC6LQ2NKX8 1250 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 FAM153CQ494X1 144 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 PLAC9Q5JTB6 97 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 SPANXN3Q5MJ09 141 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 MLIPQ5VWP3 458 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 LYPLAL1Q5VWZ2 237 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 STEAP4Q687X5 459 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 UGT3A1Q6NUS8 523 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 SPESP1Q6UW49 350 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 CEACAM20Q6UY09 585 aa4.03□□□□□ -1.76
SPG11-211ENST00000558561 SHISA6Q6ZSJ9 500 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms