RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 HUS1BQ8NHY5 278 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 UTP15Q8TED0 518 aaKnown RBP15.56■□□□□ 0.08
NEK9-211ENST00000557673 TRMOQ9BU70 441 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 KCNK13Q9HB14 408 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 KCNK9Q9NPC2 374 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 TINAGQ9UJW2 476 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 ZNF835Q9Y2P0 537 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 PCNX1Q96RV3 2341 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 CELSR1Q9NYQ6 3014 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 SCN2AQ99250 2005 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 CPAMD8Q8IZJ3 1885 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 LRIT2A6NDA9 550 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 URADA6NGE7 173 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 CDK2AP1O14519 115 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 UBFD1O14562 309 aaKnown RBP15.55■□□□□ 0.08
NEK9-211ENST00000557673 ESRRBO95718 433 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 ENO1P06733 434 aaKnown RBP15.55■□□□□ 0.08
NEK9-211ENST00000557673 HPDP32754 393 aaPredicted RBP15.55■□□□□ 0.08
NEK9-211ENST00000557673 SLC18A1P54219 525 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 RAB8AP61006 207 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 PHEXP78562 749 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 SRSF11Q05519 484 aaKnown RBP15.55■□□□□ 0.08
NEK9-211ENST00000557673 TUBA3CQ13748 450 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 FRG2Q64ET8 278 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 TUBA3EQ6PEY2 450 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 ZCCHC23Q6ZST2 131 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 ANKRD37Q7Z713 158 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 ZNF295-AS1Q8N0V1 137 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 BEST3Q8N1M1 668 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 GOLGA6L1Q8N7Z2 621 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 CDYL2Q8N8U2 506 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 ANKRD42Q8N9B4 389 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 M1APQ8TC57 530 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 ADAMTS18Q8TE60 1221 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 SREK1Q8WXA9 508 aaKnown RBP15.55■□□□□ 0.08
NEK9-211ENST00000557673 MS4A6EQ96DS6 147 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 FRG2BQ96QU4 278 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 MTERF1Q99551 399 aaKnown RBP15.55■□□□□ 0.08
NEK9-211ENST00000557673 SPOCK3Q9BQ16 436 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 KLHL31Q9H511 634 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 MID1IP1Q9NPA3 183 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 LANCL2Q9NS86 450 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 ADGRE2Q9UHX3 823 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 PPT2Q9UMR5 302 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 MEMO1Q9Y316 297 aa15.55■□□□□ 0.08
NEK9-211ENST00000557673 HIVEP1P15822 2718 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 HMGB1P1B2RPK0 211 aaPredicted RBP15.54■□□□□ 0.08
NEK9-211ENST00000557673 H3BQF6 201 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 BIRC5O15392 142 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 ERI3O43414 337 aaKnown RBP15.54■□□□□ 0.08
NEK9-211ENST00000557673 CHST10O43529 356 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 NPHS1O60500 1241 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 SMIM10L1P0DMW3 83 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 IFT88Q13099 833 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 RCN2Q14257 317 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 OR1C1Q15619 314 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 SLC5A8Q8N695 610 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 MDS2Q8NDY4 140 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 OR2L5Q8NG80 312 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 OR6Y1Q8NGX8 325 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 CHTF18Q8WVB6 975 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 TSLPQ969D9 159 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 C14orf79Q96F83 325 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 SMIM10Q96HG1 83 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 OR1F2PQ96R84 312 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 REXO4Q9GZR2 422 aaKnown RBP15.54■□□□□ 0.08
NEK9-211ENST00000557673 ACBD3Q9H3P7 528 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 ELOVL6Q9H5J4 265 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 TNFRSF12AQ9NP84 129 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 MMP25Q9NPA2 562 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 KLHL1Q9NR64 748 aa15.54■□□□□ 0.08
NEK9-211ENST00000557673 ASPDHA6ND91 283 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 MAGEB17A8MXT2 336 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 NPIPA5E9PKD4 350 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 FOXE1O00358 373 aaPredicted RBP15.53■□□□□ 0.08
NEK9-211ENST00000557673 CHRNGP07510 517 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 FHP07954 510 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 IL10P22301 178 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 CD96P40200 585 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 WDR4P57081 412 aaKnown RBP15.53■□□□□ 0.08
NEK9-211ENST00000557673 TAS2R50P59544 299 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 RPS13P62277 151 aaKnown RBP15.53■□□□□ 0.08
NEK9-211ENST00000557673 SKP1P63208 163 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 RHAGQ02094 409 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 ACTN3Q08043 901 aaPredicted RBP15.53■□□□□ 0.08
NEK9-211ENST00000557673 ABRAXAS2Q15018 415 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 TMEM35AQ53FP2 167 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 TCHHL1Q5QJ38 904 aaPredicted RBP15.53■□□□□ 0.08
NEK9-211ENST00000557673 KHDRBS2Q5VWX1 349 aaKnown RBP15.53■□□□□ 0.08
NEK9-211ENST00000557673 TTC19Q6DKK2 380 aaPredicted RBP15.53■□□□□ 0.08
NEK9-211ENST00000557673 NIPAL1Q6NVV3 410 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 TRIM40Q6P9F5 258 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 GHDCQ8N2G8 530 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 TBC1D20Q96BZ9 403 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 CMTM7Q96FZ5 175 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 SCMH1Q96GD3 660 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 F2RL3Q96RI0 385 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 KCNA7Q96RP8 456 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 OR51B5Q9H339 312 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 NPIPA1Q9UND3 350 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms