RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 C20orf96Q9NUD7 363 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 GALNT8Q9NY28 637 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SLC22A14Q9Y267 594 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SLC6A5Q9Y345 797 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 C15orf38-AP3S2A0A0A6YYH1 394 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 SDR42E2A6NKP2 422 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 RNF212BA8MTL3 300 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 HRKO00198 91 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 B3GALT2O43825 422 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 PRAMEF4O60810 478 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 CNOT4O95628 575 aaKnown RBP11.48□□□□□ -0.57
PSEN1-221ENST00000557293 GUCA1CO95843 209 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 FBXO45P0C2W1 286 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 C1GALT1C1LP0DN25 315 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 BMP7P18075 431 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 TNNI3P19429 210 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 CERS1P27544 350 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 PLA2G16P53816 162 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 STXBP1P61764 594 aaKnown RBP11.48□□□□□ -0.57
PSEN1-221ENST00000557293 ID2Q02363 134 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 TRIP13Q15645 432 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-221ENST00000557293 ACKR1Q16570 336 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 HSP90AA5PQ58FG0 334 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 NHSL2Q5HYW2 709 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 PRAMEF9Q5VWM5 478 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 CASC4Q6P4E1 433 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 ABHD17CQ6PCB6 329 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 SBSNQ6UWP8 590 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 SLCO4C1Q6ZQN7 724 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 UBE3DQ7Z6J8 389 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 TMPRSS11BQ86T26 416 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 LIX1Q8N485 282 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 SLC15A4Q8N697 577 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 C2CD4AQ8NCU7 369 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-221ENST00000557293 OR10G3Q8NGC4 313 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 HSPBAP1Q96EW2 488 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 TRIB1Q96RU8 372 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 UGT2B28Q9BY64 529 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 UBQLN3Q9H347 655 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 CALHM2Q9HA72 323 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 TAS2R13Q9NYV9 303 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 CNIH4Q9P003 139 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 MRPS33Q9Y291 106 aaKnown RBP11.48□□□□□ -0.57
PSEN1-221ENST00000557293 IKBKGQ9Y6K9 419 aa11.48□□□□□ -0.57
PSEN1-221ENST00000557293 MED12Q93074 2177 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 ANKRD33BA6NCL7 494 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 CTIFO43310 598 aaKnown RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 AHSGP02765 367 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 HPNP05981 417 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 LOXP28300 417 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 MAGEA3P43357 314 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 CDK9P50750 372 aaKnown RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 IGLV3-21P80748 117 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 TBL3Q12788 808 aaKnown RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 STX4Q12846 297 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 EFTUD2Q15029 972 aaKnown RBP eCLIP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 PPP1R3AQ16821 1122 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 ADNP2Q6IQ32 1131 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 ADGRE4PQ86SQ3 457 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 OR2L5Q8NG80 312 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 CALML6Q8TD86 181 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 DOK4Q8TEW6 326 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 SLC44A1Q8WWI5 657 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 ATL1Q8WXF7 558 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 PERPQ96FX8 193 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 MARK4Q96L34 752 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 JSRP1Q96MG2 331 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 SERINC2Q96SA4 455 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 MAPKAP1Q9BPZ7 522 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 IARS2Q9NSE4 1012 aaKnown RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 C6orf203Q9P0P8 240 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 ZNF490Q9ULM2 529 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 CAMK2AQ9UQM7 478 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 DYRK1BQ9Y463 629 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 TESMINQ9Y4I5 508 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 KCNE2Q9Y6J6 123 aa11.47□□□□□ -0.57
PSEN1-221ENST00000557293 SONP18583 2426 aaKnown RBP11.47□□□□□ -0.57
PSEN1-221ENST00000557293 SYNDIG1LA6NDD5 238 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 A8MXE2 369 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 CLEC3AO75596 197 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 C8BP07358 591 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 TMIGD3P0DMS9 266 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-221ENST00000557293 MLNP12872 115 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 GDF1P27539 372 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 NAGLUP54802 743 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 MTTPP55157 894 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 IL2P60568 153 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 SERTAD2Q14140 314 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 NTRK2Q16620 822 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 C18orf21Q32NC0 220 aaPredicted RBP11.46□□□□□ -0.57
PSEN1-221ENST00000557293 EIPR1Q53HC9 387 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 BICRALQ6AI39 1079 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 PLXDC2Q6UX71 529 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 TMIGD1Q6UXZ0 262 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 ZNF793Q6ZN11 406 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 KIAA1328Q86T90 577 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 LUZP2Q86TE4 346 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 OR4N5Q8IXE1 308 aa11.46□□□□□ -0.57
PSEN1-221ENST00000557293 PM20D2Q8IYS1 436 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms