RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 BSGP35613 385 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 ST13P50502 369 aaKnown RBP13.17□□□□□ -0.3
SLIRP-207ENST00000556831 MAPK12P53778 367 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 NAGLUP54802 743 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 SLC18A2Q05940 514 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 IMPG1Q17R60 797 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 LIPMQ5VYY2 423 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 OR52E8Q6IFG1 317 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 CUZD1Q86UP6 607 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 TRABD2AQ86V40 505 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 RPS19BP1Q86WX3 136 aaKnown RBP13.17□□□□□ -0.3
SLIRP-207ENST00000556831 CRLF3Q8IUI8 442 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 LGI4Q8N135 537 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 BEST3Q8N1M1 668 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 GBP7Q8N8V2 638 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-207ENST00000556831 TMEM52Q8NDY8 209 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 ELP5Q8TE02 316 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 HAS2Q92819 552 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 RBM18Q96H35 190 aaKnown RBP13.17□□□□□ -0.3
SLIRP-207ENST00000556831 ART5Q96L15 291 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 C5orf34Q96MH7 638 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 MRPL1Q9BYD6 325 aaKnown RBP13.17□□□□□ -0.3
SLIRP-207ENST00000556831 MKS1Q9NXB0 559 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 KCMF1Q9P0J7 381 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 ADAM29Q9UKF5 820 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 PCDHGA10Q9Y5H3 936 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 SHANK1Q9Y566 2161 aa13.17□□□□□ -0.3
SLIRP-207ENST00000556831 A0A0A6YYD5 115 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 GABRR3A8MPY1 467 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 C17orf105B2RV13 164 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 PPP6CO00743 305 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 GBAP04062 536 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 KLK1P06870 262 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 TNFSF10P50591 281 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 HNRNPH2P55795 449 aaKnown RBP13.16□□□□□ -0.3
SLIRP-207ENST00000556831 DNAJB13P59910 316 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 ID2Q02363 134 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 INAQ16352 499 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 FRMD7Q6ZUT3 714 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 COMMD6Q7Z4G1 85 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 KIF2BQ8N4N8 673 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 CISD2Q8N5K1 135 aaKnown RBP13.16□□□□□ -0.3
SLIRP-207ENST00000556831 MORN4Q8NDC4 146 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 AGAP11Q8TF27 550 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 NCLNQ969V3 563 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 MIB2Q96AX9 1013 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 HBEGFQ99075 208 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 FAIM2Q9BWQ8 316 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 OR8D2Q9GZM6 311 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 GSTO2Q9H4Y5 243 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 CDCP1Q9H5V8 836 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 FARSBQ9NSD9 589 aaKnown RBP13.16□□□□□ -0.3
SLIRP-207ENST00000556831 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.16□□□□□ -0.3
SLIRP-207ENST00000556831 OXSMQ9NWU1 459 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 FAM53CQ9NYF3 392 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 VPS29Q9UBQ0 182 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 VTI1BQ9UEU0 232 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 RAB21Q9UL25 225 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 PLLPQ9Y342 182 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 ATG4BQ9Y4P1 393 aa13.16□□□□□ -0.3
SLIRP-207ENST00000556831 CPAMD8Q8IZJ3 1885 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 GNG14A0A1W2PPG7 69 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 CDK2AP1O14519 115 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 PROM1O43490 865 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 TMPRSS11DO60235 418 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 FGF17O60258 216 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 PRAMEF2O60811 474 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 SPAG7O75391 227 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 ZFAND5O76080 213 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 AIFM1O95831 613 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 CHEK2O96017 543 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 CD46P15529 392 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 ALOX15P16050 662 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-207ENST00000556831 PIK3R1P27986 724 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 STT3AP46977 705 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 FOLH1Q04609 750 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 UBAP2LQ14157 1087 aaKnown RBP13.15□□□□□ -0.3
SLIRP-207ENST00000556831 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 C18orf63Q68DL7 685 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 H3F3CQ6NXT2 135 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 HSDL2Q6YN16 418 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 SH2D5Q6ZV89 423 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 METTL4Q8N3J2 472 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 BANPQ8N9N5 519 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 TMEM178AQ8NBL3 297 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 FAM98AQ8NCA5 519 aaKnown RBP13.15□□□□□ -0.3
SLIRP-207ENST00000556831 GALNT11Q8NCW6 608 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 CATSPER1Q8NEC5 780 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 THAP3Q8WTV1 239 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-207ENST00000556831 TMEM125Q96AQ2 219 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 SNRNP40Q96DI7 357 aaKnown RBP13.15□□□□□ -0.3
SLIRP-207ENST00000556831 FAM111AQ96PZ2 611 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 TRMOQ9BU70 441 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 TMEM109Q9BVC6 243 aa13.15□□□□□ -0.3
SLIRP-207ENST00000556831 STMN4Q9H169 189 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-207ENST00000556831 ANKRD10Q9NXR5 420 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms