RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.59□□□□□ -0.71
FOXN3-212ENST00000556541 PPCDCQ96CD2 204 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 PEX11GQ96HA9 241 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 ZNF681Q96N22 645 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 IP6K3Q96PC2 410 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 CSF3RQ99062 836 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 DPH1Q9BZG8 443 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 NMUR2Q9GZQ4 415 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 SLC35C2Q9NQQ7 365 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 PRTFDC1Q9NRG1 225 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 GIMAP4Q9NUV9 329 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 CTSFQ9UBX1 484 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 BAIAP2L1Q9UHR4 511 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 AK5Q9Y6K8 562 aa10.59□□□□□ -0.71
FOXN3-212ENST00000556541 SCN2AQ99250 2005 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 TCRBV16S1A1N1A0A5B0 115 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 GABRR3A8MPY1 467 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 BBIP1A8MTZ0 92 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 MYO1GB0I1T2 1018 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 RNASET2O00584 256 aaKnown RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 FCHO1O14526 889 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 SCN2BO60939 215 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 CNOT3O75175 753 aaKnown RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 ATP1B1P05026 303 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 SLC35E2P0CK97 266 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 CSNK2A2P19784 350 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 NCF2P19878 526 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 PTPN4P29074 926 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 KIR3DL1P43629 444 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 POLR2JP52435 117 aaKnown RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 UFM1P61960 85 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 RPS15P62841 145 aaKnown RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 KLF10Q13118 480 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 DNASE1L3Q13609 305 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 SYT16Q17RD7 645 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 CPTPQ5TA50 214 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 ANXA8L1Q5VT79 327 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 LCN10Q6JVE6 187 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 MARCH9Q86YJ5 346 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 TICAM1Q8IUC6 712 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 FUNDC1Q8IVP5 155 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 ST13P4Q8IZP2 240 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 METTL27Q8N6F8 245 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 VPS37AQ8NEZ2 397 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 ZFP28Q8NHY6 868 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 ZNF675Q8TD23 568 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 GATA6Q92908 595 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 FGF11Q92914 225 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 ANKRD9Q96BM1 317 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 ZBED6CLQ96FA7 236 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 VPS50Q96JG6 964 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 LRRC37BQ96QE4 947 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 CCDC106Q9BWC9 280 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 VN1R1Q9GZP7 353 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 AKIRIN1Q9H9L7 192 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 NEUROD4Q9HD90 331 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 SLC52A3Q9NQ40 469 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 C19orf25Q9UFG5 118 aaPredicted RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 BTNL2Q9UIR0 455 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 UTS2RQ9UKP6 389 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 ANGPTL2Q9UKU9 493 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 PPIEQ9UNP9 301 aaKnown RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 FARSAQ9Y285 508 aaKnown RBP10.58□□□□□ -0.72
FOXN3-212ENST00000556541 GMEB1Q9Y692 573 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 CAPN7Q9Y6W3 813 aa10.58□□□□□ -0.72
FOXN3-212ENST00000556541 CHD6Q8TD26 2715 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 CAPN14A8MX76 684 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 IDSB3KWA1 339 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 PGRMC2O15173 223 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 CFLARO15519 480 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 PDPK1O15530 556 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 FGF17O60258 216 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 ALOX12BO75342 701 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 CAPNS1P04632 268 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 PGRP06401 933 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 CPMP14384 443 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 COX7A2P14406 83 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 TCN2P20062 427 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 MMP11P24347 488 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 PIK3R1P27986 724 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 IL12AP29459 219 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 NTSP30990 170 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 S100A3P33764 101 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 MPIP34949 423 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 FOLR3P41439 243 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 STT3AP46977 705 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 PLIN5Q00G26 463 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 MC1RQ01726 317 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 FOLH1Q04609 750 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 SSPNQ14714 243 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 KRT72Q14CN4 511 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 SPRED3Q2MJR0 410 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 VWA2Q5GFL6 755 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 MTDHQ86UE4 582 aaKnown RBP10.57□□□□□ -0.72
FOXN3-212ENST00000556541 KRTCAP2Q8N6L1 136 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 ENDOVQ8N8Q3 282 aaKnown RBP10.57□□□□□ -0.72
FOXN3-212ENST00000556541 ZNF248Q8NDW4 579 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 TMEM52Q8NDY8 209 aa10.57□□□□□ -0.72
FOXN3-212ENST00000556541 GOT1L1Q8NHS2 421 aaPredicted RBP10.57□□□□□ -0.72
FOXN3-212ENST00000556541 RP9Q8TA86 221 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms