RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 STMN1P16949 149 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 CD22P20273 847 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 ATP5A1P25705 553 aaKnown RBP16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 SLC10A1Q14973 349 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 AP5B1Q2VPB7 878 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 SLC25A35Q3KQZ1 300 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 TMEM35AQ53FP2 167 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 GLE1Q53GS7 698 aaKnown RBP16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 PRAMEF9Q5VWM5 478 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 C8orf74Q6P047 294 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 ZNF793Q6ZN11 406 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 ACOT4Q8N9L9 421 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 PDPRQ8NCN5 879 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 MS4A8Q9BY19 250 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 TUBA8Q9NY65 449 aaPredicted RBP16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 BOKQ9UMX3 212 aaPredicted RBP16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 MTO1Q9Y2Z2 717 aaKnown RBP16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 ATG4BQ9Y4P1 393 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 FAM215AQ9Y5M1 114 aa16.3■□□□□ 0.2
SDR39U1-219ENST00000556523 TRGV5A0A0B4J1U4 118 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 RTCAO00442 366 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 HCN1O60741 890 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 SH3BGRLO75368 114 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 KRT38O76015 456 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 ETHE1O95571 254 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 GABRA1P14867 456 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 CD1DP15813 335 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 HIST1H1TP22492 207 aaPredicted RBP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 SERPINB1P30740 379 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 RPL21P46778 160 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 RAP1GDS1P52306 607 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 KCNJ2P63252 427 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 MRPS25P82663 173 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 PLIN5Q00G26 463 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 FOLH1Q04609 750 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 FOXO1Q12778 655 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 TBL3Q12788 808 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 ASPHQ12797 758 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 OR4D1Q15615 310 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 TBCCQ15814 346 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 MPEG1Q2M385 716 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 HYAL4Q2M3T9 481 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 MED27Q6P2C8 311 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 CHSY3Q70JA7 882 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 WDR53Q7Z5U6 358 aaPredicted RBP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 NUBPLQ8TB37 319 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 ZNF721Q8TF20 911 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 ZNF473Q8WTR7 871 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 PYROXD1Q8WU10 500 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 CENPKQ9BS16 269 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 MCMBPQ9BTE3 642 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 LRRC1Q9BTT6 524 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 ALKBH4Q9NXW9 302 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 WHRNQ9P202 907 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 SNX24Q9Y343 169 aa16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-219ENST00000556523 A0A0G2JNJ9 132 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 TP73O15350 636 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 PIAS1O75925 651 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 SCELO95171 688 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 WISP3O95389 354 aaPredicted RBP16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 NADKO95544 446 aaPredicted RBP16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 CELA3AP09093 270 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 DNAJA1P31689 397 aaKnown RBP16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 PIGAP37287 484 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 STT3AP46977 705 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 CALCOCO2Q13137 446 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 PIGGQ5H8A4 983 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 SLC22A10Q63ZE4 541 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 UBE3DQ7Z6J8 389 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 LIX1Q8N485 282 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 NOA1Q8NC60 698 aaKnown RBP16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 ANKRD9Q96BM1 317 aaPredicted RBP16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 CMTM7Q96FZ5 175 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 GPR22Q99680 433 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 CPNE1Q99829 537 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 SMYD2Q9NRG4 433 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 DNAJB12Q9NXW2 375 aaKnown RBP16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 B4GALT7Q9UBV7 327 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 Q9UFV3 132 aa16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 PTBP2Q9UKA9 531 aaKnown RBP16.28■□□□□ 0.2
SDR39U1-219ENST00000556523 FGF17O60258 216 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 ZNF354AO60765 605 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 TGFB1P01137 390 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 GP5P40197 560 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 CBLBQ13191 982 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 DDX39BQ13838 428 aaKnown RBP16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 RIPPLY2Q5TAB7 128 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 PRAMEF20Q5VT98 475 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 RTL6Q6ICC9 239 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 OR4N5Q8IXE1 308 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 C9orf40Q8IXQ3 194 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 DND1Q8IYX4 353 aaKnown RBP16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 FAM13CQ8NE31 585 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 SPACA9Q96E40 222 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 RBM18Q96H35 190 aaKnown RBP16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 SENP5Q96HI0 755 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 GAL3ST4Q96RP7 486 aa16.27■□□□□ 0.2
SDR39U1-219ENST00000556523 RBBP8Q99708 897 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms