RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 NUDT21O43809 227 aaKnown RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 VNN2O95498 520 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 AK1P00568 194 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 MT-ATP6P00846 226 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 OAS1P00973 400 aaKnown RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 HLA-DQB2P05538 268 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 RHOCP08134 193 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 CELA2AP08217 269 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SRPRAP08240 638 aaKnown RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 HMBSP08397 361 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 CTSAP10619 480 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 MBL2P11226 248 aaPredicted RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 LYL1P12980 280 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 ARSAP15289 507 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 HMGA1P17096 107 aaKnown RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 ENGP17813 658 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 CRABP2P29373 138 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 ADRA1AP35348 466 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 GRIA1P42261 906 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 MAGEA9P43362 315 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 MTNR1AP48039 350 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SERPINH1P50454 418 aaKnown RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 NAGLUP54802 743 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 CYP4F2P78329 520 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 GNA12Q03113 381 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 ACOX1Q15067 660 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SLC1A5Q15758 541 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 LRRC26Q2I0M4 334 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 TCTN1Q2MV58 587 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 TAF1BQ53T94 588 aaPredicted RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 CERCAMQ5T4B2 595 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 AADACL4Q5VUY2 407 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 TSSK4Q6SA08 328 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SH2D5Q6ZV89 423 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 Q6ZWC4 215 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SLC29A4Q7RTT9 530 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 TFAP2DQ7Z6R9 452 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SYVN1Q86TM6 617 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 VASH2Q86V25 355 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 TMEM173Q86WV6 379 aaPredicted RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 NUDCD3Q8IVD9 361 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 P3H2Q8IVL5 708 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 DDIASQ8IXT1 998 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 ARL14Q8N4G2 192 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SIRT6Q8N6T7 355 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 CCDC63Q8NA47 563 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SPERTQ8NA61 448 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 LEMD2Q8NC56 503 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 HJURPQ8NCD3 748 aaPredicted RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 RDH11Q8TC12 318 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 PHOSPHO2Q8TCD6 241 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 OSCP1Q8WVF1 389 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 IGSF8Q969P0 613 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 PABPC5Q96DU9 382 aaKnown RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 HMCESQ96FZ2 354 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SERAC1Q96JX3 654 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 B3GALT6Q96L58 329 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 MACROD1Q9BQ69 325 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 THAP7Q9BT49 309 aaPredicted RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 EDEM2Q9BV94 578 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 CINPQ9BW66 212 aaPredicted RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 TSSK1BQ9BXA7 367 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 ZBP1Q9H171 429 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 PLK3Q9H4B4 646 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 RHOJQ9H4E5 214 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 TFB2MQ9H5Q4 396 aaKnown RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 YY1AP1Q9H869 796 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 KIF9Q9HAQ2 790 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 C20orf141Q9NUB4 165 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 C20orf96Q9NUD7 363 aaPredicted RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 TMEM184CQ9NVA4 438 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 IL1RAPL1Q9NZN1 696 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 TEKT2Q9UIF3 430 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 STOML2Q9UJZ1 356 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 PSME2Q9UL46 239 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 INSL5Q9Y5Q6 135 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 ARHGEF17Q96PE2 2063 aaPredicted RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 NYNRINQ9P2P1 1898 aaKnown RBP4.9□□□□□ -1.63
SRP54-211ENST00000556445 CHD5Q8TDI0 1954 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3DA0A087WVF3 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3IA0A087WXS9 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3EA0A087X179 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3KA0A087X1G2 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 LOC285095A0A1B0GVY8 99 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 A0A1W2PR77 199 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ELOVL7A1L3X0 281 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3BA6NDS4 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3FA6NER0 549 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 CFAP73A6NFT4 308 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ZSCAN5BA6NJL1 495 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D3LB9A6J9 549 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 GOLGA8RI6L899 631 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ADAM12O43184 909 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 KDELR3O43731 214 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PLIN3O60664 434 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 USP12O75317 370 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 PMPCBO75439 489 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 ZNF821O75541 412 aaPredicted RBP4.89□□□□□ -1.63
SRP54-211ENST00000556445 CNTN5O94779 1100 aa4.89□□□□□ -1.63
SRP54-211ENST00000556445 KAT7O95251 611 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms