RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ARL13AQ5H913 290 aaPredicted RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 VWA5B1Q5TIE3 1220 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 H3F3CQ6NXT2 135 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 JMJD6Q6NYC1 403 aaPredicted RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 GALNT18Q6P9A2 607 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 PAPD4Q6PIY7 484 aaKnown RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 SCIMPQ6UWF3 145 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 RNF165Q6ZSG1 346 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 ASB18Q6ZVZ8 466 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 CUZD1Q86UP6 607 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 NUDT13Q86X67 352 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 HOMEZQ8IX15 550 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 RBMXL3Q8N7X1 1067 aaKnown RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 M1APQ8TC57 530 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 TANKQ92844 425 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 ARL8AQ96BM9 186 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 TM4SF18Q96CE8 201 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 THOC3Q96J01 351 aaKnown RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 SHCBP1LQ9BZQ2 653 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 MMP25Q9NPA2 562 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 LYARQ9NX58 379 aaKnown RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 MS4A12Q9NXJ0 267 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 VTI1BQ9UEU0 232 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 PHF11Q9UIL8 331 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 MRPS33Q9Y291 106 aaKnown RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 ZNF451Q9Y4E5 1061 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 SCN2AQ99250 2005 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 SAGE2PA6NJ88 616 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 NPIPB8E9PQR5 432 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 AZIN1O14977 448 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 PGRMC2O15173 223 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 FGF17O60258 216 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 KLHL41O60662 606 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 PRKRAO75569 313 aaKnown RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 ZWINTO95229 277 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 AIFM1O95831 613 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 SERPINB5P36952 375 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 SLC26A5P58743 744 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 MAGOHP61326 146 aaKnown RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 HMGCS1Q01581 520 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 ACTN3Q08043 901 aaPredicted RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 NFATC3Q12968 1075 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 SLC13A2Q13183 592 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 TERF2Q15554 542 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 EXT1Q16394 746 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 CCNYL2Q5T2Q4 361 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 AGAP7PQ5VUJ5 663 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 CLEC6AQ6EIG7 209 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 CYP20A1Q6UW02 462 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 ZCCHC23Q6ZST2 131 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 PAGE2Q7Z2X7 111 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 CLNKQ7Z7G1 428 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 PTRH1Q86Y79 214 aaKnown RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 HPS6Q86YV9 775 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 NUDCD3Q8IVD9 361 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 C1orf52Q8N6N3 182 aaKnown RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 BRIX1Q8TDN6 353 aaKnown RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 ELP5Q8TE02 316 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 PTPMT1Q8WUK0 201 aaPredicted RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 APIPQ96GX9 242 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 AGAP4Q96P64 663 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 LMF1Q96S06 567 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 LPAR4Q99677 370 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 NPAS2Q99743 824 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 ALOXE3Q9BYJ1 711 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 TUBB1Q9H4B7 451 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 RPF2Q9H7B2 306 aaKnown RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 NMRK1Q9NWW6 199 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 TEX10Q9NXF1 929 aaPredicted RBP9.02□□□□□ -0.97
SRP54-210ENST00000556380 CES1P1Q9UKY3 287 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 NUP210LQ5VU65 1888 aa9.02□□□□□ -0.97
SRP54-210ENST00000556380 UBR5O95071 2799 aaPredicted RBP9.01□□□□□ -0.97
SRP54-210ENST00000556380 TENM4Q6N022 2769 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 MYOCOSA0A1B0GUC4 107 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 WDR91A4D1P6 747 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 SYNDIG1LA6NDD5 238 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 A8MUA0 341 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 TMEM233B4DJY2 109 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 B8ZZF3 427 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 SUV39H1O43463 412 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 LDB3O75112 727 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 GPR75O95800 540 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 DDAH2O95865 285 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 PRPH2P23942 346 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 CD97P48960 835 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 TRA2BP62995 288 aaKnown RBP9.01□□□□□ -0.97
SRP54-210ENST00000556380 ID2Q02363 134 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 MFAP5Q13361 173 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 SERTAD2Q14140 314 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 KIAA0040Q15053 153 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 ELAVL1Q15717 326 aaKnown RBP9.01□□□□□ -0.97
SRP54-210ENST00000556380 BTBD16Q32M84 506 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 CRB2Q5IJ48 1285 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 NDUFAF5Q5TEU4 345 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 AGBL2Q5U5Z8 902 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 KANK2Q63ZY3 851 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 B3GNTL1Q67FW5 361 aaPredicted RBP9.01□□□□□ -0.97
SRP54-210ENST00000556380 ISLR2Q6UXK2 745 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 DGAT2L6Q6ZPD8 337 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms