RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 HSPD1P10809 573 aaKnown RBP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 FOSL2P15408 326 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 ALOX12P18054 663 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 IL4RP24394 825 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 SLC1A4P43007 532 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 VAMP7P51809 220 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 HNRNPKP61978 463 aaKnown RBP eCLIP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 TRDNQ13061 729 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 ITGA7Q13683 1181 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 VEZF1Q14119 521 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 GPNMBQ14956 572 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 ALX1Q15699 326 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 FAM205BPQ63HN1 556 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 SEL1L3Q68CR1 1132 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 FAM198BQ6UWH4 519 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 SNX32Q86XE0 403 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 OR10Q1Q8NGQ4 319 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 AFAP1L1Q8TED9 768 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 TMCO6Q96DC7 493 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 FAM71F1Q96KD3 344 aaPredicted RBP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 BARD1Q99728 777 aaKnown RBP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 MAP3K3Q99759 626 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 IQCGQ9H095 443 aaKnown RBP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 GOLPH3LQ9H4A5 285 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 TUBB1Q9H4B7 451 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 HEXA-AS1Q9H8Q6 139 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 BLOC1S4Q9NUP1 217 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 GDE1Q9NZC3 331 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 ZMAT5Q9UDW3 170 aaKnown RBP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 DDX25Q9UHL0 483 aaKnown RBP3.99□□□□□ -1.77
PRPF39-209ENST00000556353 LNPEPQ9UIQ6 1025 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 WDR83OSQ9Y284 106 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 TTLL3Q9Y4R7 772 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 SELENOKQ9Y6D0 94 aa3.99□□□□□ -1.77
PRPF39-209ENST00000556353 CCDC171Q6TFL3 1326 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 PTPRZ1P23471 2315 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 EPG5Q9HCE0 2579 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 TRBV5-5A0A0J9YX44 114 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 A0A1W2PPQ1 181 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 TSPY2A6NKD2 308 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 RANBP6O60518 1105 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 POP4O95707 220 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 HOXD4P09016 255 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 RAB40ALP0C0E4 278 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 CCNCP24863 283 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 ELAVL4P26378 380 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 EIF2DP41214 584 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 ZFP36L2P47974 494 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 CLNS1AP54105 237 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 CCL23P55773 120 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 RPS6P62753 249 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 ROR1Q01973 937 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 CD300CQ08708 224 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 FCHO2Q0JRZ9 810 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 SLMAPQ14BN4 828 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 FAM189A2Q15884 450 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 MZT2BQ6NZ67 158 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 ZNF841Q6ZN19 808 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 CDHR3Q6ZTQ4 885 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 FCRLAQ7L513 359 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 TMCO2Q7Z6W1 182 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 FAM131BQ86XD5 332 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 MARCH9Q86YJ5 346 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 ZNF444Q8N0Y2 327 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 OR8H2Q8N162 312 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 FAM89BQ8N5H3 189 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 TSPAN14Q8NG11 270 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 C2orf48Q96LS8 159 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 GLT1D1Q96MS3 346 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 PRRG4Q9BZD6 226 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 PDRG1Q9NUG6 133 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 PRMT7Q9NVM4 692 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 QPCTLQ9NXS2 382 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 C6orf203Q9P0P8 240 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 GTF3C4Q9UKN8 822 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 CCPG1Q9ULG6 757 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 PPIEQ9UNP9 301 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 TMEM5Q9Y2B1 443 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 RRP15Q9Y3B9 282 aaKnown RBP3.98□□□□□ -1.77
PRPF39-209ENST00000556353 CEP295Q9C0D2 2601 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 TRIP11Q15643 1979 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 C2orf16Q68DN1 1984 aa3.98□□□□□ -1.77
PRPF39-209ENST00000556353 MROH7Q68CQ1 1323 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 WDR19Q8NEZ3 1342 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 DENND4AQ7Z401 1863 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 IGHV4-30-2A0A087WSY4 118 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 GLOD5A6NK44 160 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 KLLNB2CW77 178 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 K7ENM7 598 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 MTRF1O75570 445 aaKnown RBP3.97□□□□□ -1.77
PRPF39-209ENST00000556353 ATP1B1P05026 303 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 TOP1P11387 765 aaKnown RBP3.97□□□□□ -1.77
PRPF39-209ENST00000556353 FOLR2P14207 255 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 RPS2P15880 293 aaKnown RBP3.97□□□□□ -1.77
PRPF39-209ENST00000556353 CALML3P27482 149 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 OR3A2P47893 321 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 BPIFB3P59826 476 aa3.97□□□□□ -1.77
PRPF39-209ENST00000556353 ARHGAP1Q07960 439 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms