RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 FCRL4Q96PJ5 515 aa14.17□□□□□ -0.14
CUX1-215ENST00000556210 TP63Q9H3D4 680 aaPredicted RBP14.17□□□□□ -0.14
CUX1-215ENST00000556210 FAM186AA6NE01 2351 aa14.17□□□□□ -0.14
CUX1-215ENST00000556210 SPTBP11277 2137 aa14.17□□□□□ -0.14
CUX1-215ENST00000556210 PLXNA1Q9UIW2 1896 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 PSME4Q14997 1843 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 CCDC182A6NF36 153 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 CDC123O75794 336 aaPredicted RBP14.16□□□□□ -0.14
CUX1-215ENST00000556210 LATS1O95835 1130 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 IGFBP4P22692 258 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 TUBA1BP68363 451 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 MAD2L1BPQ15013 274 aaPredicted RBP14.16□□□□□ -0.14
CUX1-215ENST00000556210 MPP7Q5T2T1 576 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 AGAP7PQ5VUJ5 663 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 ZNF691Q5VV52 312 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 TMEM107Q6UX40 140 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 TUBA1AQ71U36 451 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 LHFPL3Q86UP9 236 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 ADIPOR2Q86V24 386 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 DCUN1D3Q8IWE4 304 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 C19orf18Q8NEA5 215 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 OR4K3Q96R72 315 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 MBOAT4Q96T53 435 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 COQ7Q99807 217 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 DPH7Q9BTV6 452 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 SPNS1Q9H2V7 528 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 MKLN1Q9UL63 735 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 PCDHGA12O60330 932 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 APODP05090 189 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 CTSLP07711 333 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 BMPR1AP36894 532 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 CLK3P49761 638 aaKnown RBP14.16□□□□□ -0.14
CUX1-215ENST00000556210 SELENOWP63302 87 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 NKX3-2P78367 333 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 ZNF385BQ569K4 471 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 TMEM215Q68D42 235 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 B3GLCTQ6Y288 498 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 RNF44Q7L0R7 432 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 RBM45Q8IUH3 476 aaKnown RBP14.16□□□□□ -0.14
CUX1-215ENST00000556210 CPXM2Q8N436 756 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 RHOXF1Q8NHV9 184 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 SMPDL3AQ92484 453 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 FCGR1BQ92637 280 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 TANKQ92844 425 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 TRIM63Q969Q1 353 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 RGMAQ96B86 450 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 MAPRE3Q9UPY8 281 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 POFUT2Q9Y2G5 429 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 SNX11Q9Y5W9 270 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 EDDM13A0A1B0GTR0 161 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 AREL1O15033 823 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 ANKRD28O15084 1053 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 PRAMEF4O60810 478 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 ITGB8P26012 769 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 SOX3P41225 446 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 ISL1P61371 349 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 MESP2Q0VG99 397 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 NNATQ16517 81 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 C5orf22Q49AR2 442 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 PRAMEF9Q5VWM5 478 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 RAD9AQ99638 391 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 MGLLQ99685 303 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 PLEKHM1Q9Y4G2 1056 aa14.16□□□□□ -0.14
CUX1-215ENST00000556210 CKAP5Q14008 2032 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 DYRK3O43781 588 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 TNFRSF21O75509 655 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 UPK1BO75841 260 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 CAPNS1P04632 268 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 CLDN2P57739 230 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 PPP2R2BQ00005 443 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.15□□□□□ -0.14
CUX1-215ENST00000556210 SYPL1Q16563 259 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 DEFB134Q4QY38 66 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 C10orf62Q5T681 223 aaPredicted RBP14.15□□□□□ -0.14
CUX1-215ENST00000556210 TMPRSS11AQ6ZMR5 421 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 USP51Q70EK9 711 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 C12orf40Q86WS4 652 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 TMEFF1Q8IYR6 380 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 DEFB119Q8N690 84 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 RNFT2Q96EX2 444 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 C1QTNF3Q9BXJ4 246 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 RETREG1Q9H6L5 497 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 CPNE5Q9HCH3 593 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 DMRT3Q9NQL9 472 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 SATB2Q9UPW6 733 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 SH2B3Q9UQQ2 575 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 NOTOA8MTQ0 251 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 OR10H2O60403 315 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 EFCAB14O75071 495 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 PDE9AO76083 593 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 GNRH1P01148 92 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 IFNA16P05015 189 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 NPPBP16860 134 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 TYRP1P17643 537 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 CSRP3P50461 194 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 MTAPQ13126 283 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 SLAMF1Q13291 335 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 DUSP7Q16829 419 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 HSDL2Q6YN16 418 aa14.15□□□□□ -0.14
CUX1-215ENST00000556210 TSPYL5Q86VY4 417 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms