RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CARS2Q9HA77 564 aaKnown RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 FZD3Q9NPG1 666 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 IMP3Q9NV31 184 aaKnown RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 CMTM6Q9NX76 183 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 SIRT5Q9NXA8 310 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PLAGL1Q9UM63 463 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 DMTF1Q9Y222 760 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 KCNK6Q9Y257 313 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 LRRC42Q9Y546 428 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PCYT1BQ9Y5K3 369 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 A0A096LPI6 279 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 GNG14A0A1W2PPG7 69 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 POM121BA6NF01 834 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ANKDD1BA6NHY2 528 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 AQP12BA6NM10 295 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 K7ENP7 123 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 FXYD1O00168 92 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 MSTNO14793 375 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 KCNAB3O43448 404 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 OIP5O43482 229 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 LATO43561 262 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ZNF217O75362 1048 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 PRKD3O94806 890 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CCNDBP1O95273 360 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 FKBP9O95302 570 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TNFP01375 233 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 IGLV3-19P01714 112 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 FUCA1P04066 466 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CFIP05156 583 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 MTHFD1P11586 935 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CDH1P12830 882 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 COX7A2P14406 83 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 DDX5P17844 614 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 IL10P22301 178 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 HRH2P25021 359 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 HOXD12P35452 270 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 GRK3P35626 688 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CASRP41180 1078 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 KIR3DL1P43629 444 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 RABIFP47224 123 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 LSSP48449 732 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TRPC1P48995 793 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 GSK3BP49841 420 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CLDN2P57739 230 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 C21orf58P58505 322 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 GPR85P60893 370 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 RPS13P62277 151 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ABATP80404 500 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 LRRC74AQ0VAA2 488 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 RBBP5Q15291 538 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 RPE65Q16518 533 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TBC1D25Q3MII6 688 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 LINC00303Q3SY05 128 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 RNFT1Q5M7Z0 435 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 SPANXN4Q5MJ08 99 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ANXA8L1Q5VT79 327 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ANKRD34AQ69YU3 496 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 FDX2Q6P4F2 183 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ABHD17CQ6PCB6 329 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 INO80CQ6PI98 192 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ABRAXAS1Q6UWZ7 409 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TMIGD1Q6UXZ0 262 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 DLEU7Q6UYE1 221 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 WASH2PQ6VEQ5 465 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 FKBP9P1Q75LS8 142 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 RD3Q7Z3Z2 195 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TMPRSS12Q86WS5 348 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 AQP12AQ8IXF9 295 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 PQLC1Q8N2U9 271 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TMEM132CQ8N3T6 1108 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 C2orf73Q8N5S3 287 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 DEFB119Q8N690 84 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 KRTCAP2Q8N6L1 136 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 C1orf52Q8N6N3 182 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 FAM156AQ8NDB6 213 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CATSPER1Q8NEC5 780 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ABHD11Q8NFV4 315 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 OR2L8Q8NGY9 312 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CLHC1Q8NHS4 586 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CEP76Q8TAP6 659 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 SNX19Q92543 992 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 GTF2H4Q92759 462 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 POP5Q969H6 163 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 DUS3LQ96G46 650 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 BMFQ96LC9 184 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 PPM1MQ96MI6 270 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 QRFPRQ96P65 431 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 GBP5Q96PP8 586 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CGREF1Q99674 301 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 KCTD14Q9BQ13 255 aaPredicted RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 ECSITQ9BQ95 431 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 CENPKQ9BS16 269 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 THUMPD3Q9BV44 507 aaKnown RBP6.49□□□□□ -1.37
SLIRP-204ENST00000555890 EBPLQ9BY08 206 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 KLHL4Q9C0H6 718 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 PCDHAC1Q9H158 963 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 RHBGQ9H310 441 aa6.49□□□□□ -1.37
SLIRP-204ENST00000555890 TCF7L1Q9HCS4 588 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms