RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 CD8B2A6NJW9 211 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 AHRRA9YTQ3 701 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 EIF3FO00303 357 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 OR1F1O43749 312 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 LIASO43766 372 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 ZBTB14O43829 449 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 SMPD2O60906 423 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 TBX6O95947 436 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 STIP1P31948 543 aaKnown RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 AHRP35869 848 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 CCR8P51685 355 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 HSD17B7P56937 341 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 SESN2P58004 480 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 RAB8AP61006 207 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 SKP1P63208 163 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 REEP5Q00765 189 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 CTBP1Q13363 440 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 NAE1Q13564 534 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 RUNX2Q13950 521 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 ELAVL1Q15717 326 aaKnown RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 PHKG1Q16816 387 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 CATSPEREQ5SY80 951 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 DCST1Q5T197 706 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 HSDL2Q6YN16 418 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 FAM47EQ6ZV65 393 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 UBE2R2Q712K3 238 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 ABHD13Q7L211 337 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 HEATR5AQ86XA9 2040 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 CPNE9Q8IYJ1 553 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 OR56A3Q8NH54 315 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 PIGTQ969N2 578 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 UTP4Q969X6 686 aaKnown RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 LRRC46Q96FV0 321 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 TIMP4Q99727 224 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 YIPF4Q9BSR8 244 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 UBQLN3Q9H347 655 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 ZFP64Q9NPA5 681 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 PNO1Q9NRX1 252 aaKnown RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 INTS10Q9NVR2 710 aaKnown RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 SYBUQ9NX95 663 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 ALKBH4Q9NXW9 302 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 GALNT8Q9NY28 637 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 REXO2Q9Y3B8 237 aaKnown RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 CHCHD2Q9Y6H1 151 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.33□□□□□ -1.08
PRKCH-218ENST00000555628 EXPH5Q8NEV8 1989 aa8.33□□□□□ -1.08
PRKCH-218ENST00000555628 TENM1Q9UKZ4 2725 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 HMX2A2RU54 273 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 BTNL10A8MVZ5 291 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 CYR61O00622 381 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 CNOT4O95628 575 aaKnown RBP8.32□□□□□ -1.08
PRKCH-218ENST00000555628 IGKV3-11P04433 115 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 BMP7P18075 431 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 CCND1P24385 295 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 MGAT1P26572 445 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 RNF4P78317 190 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 RGS1Q08116 209 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 MPEG1Q2M385 716 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 TTLL9Q3SXZ7 439 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 NHSL2Q5HYW2 709 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 HECTD2Q5U5R9 776 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 FBXW10Q5XX13 1052 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 ADGRE4PQ86SQ3 457 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 SDCCAG8Q86SQ7 713 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-218ENST00000555628 DENND6AQ8IWF6 608 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 TRIM42Q8IWZ5 723 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 NEIL2Q969S2 332 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 ISL2Q96A47 359 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 PERPQ96FX8 193 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 QRFPRQ96P65 431 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 CSF3RQ99062 836 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 GPR21Q99679 349 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 CCDC77Q9BR77 488 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 HAUS8Q9BT25 410 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 LDAHQ9H6V9 325 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 SAMD15Q9P1V8 674 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 ADGRE2Q9UHX3 823 aa8.32□□□□□ -1.08
PRKCH-218ENST00000555628 CNOT11Q9UKZ1 510 aaKnown RBP8.32□□□□□ -1.08
PRKCH-218ENST00000555628 TMEM238LA0A1B0GVL6 79 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 GOLGA6L9A6NEM1 432 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 EEF1E1-BLOC1S5C9J1V9 151 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 E5RI56 91 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 PSMD12O00232 456 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 CTIFO43310 598 aaKnown RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 EEF1E1O43324 174 aaKnown RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 TRIM3O75382 744 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 SERPINA6P08185 405 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 ZSCAN5DPP0CG00 497 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 CTSSP25774 331 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 HNRNPH1P31943 449 aaKnown RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 CCKARP32238 428 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 RPL22P35268 128 aaKnown RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 GRK3P35626 688 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 SLCO1A2P46721 670 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 PTH2RP49190 550 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 PCYT1AP49585 367 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 AGFG1P52594 562 aaKnown RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 RAB38P57729 211 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 FOXF2Q12947 444 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms