RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 GTSF1Q8WW33 167 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 C16orf58Q96GQ5 468 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 SIGLEC12Q96PQ1 595 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 DEFB126Q9BYW3 111 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 DPEP3Q9H4B8 488 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 GPR173Q9NS66 373 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 ABCC13Q9NSE7 274 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 PLEK2Q9NYT0 353 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 EIF3KQ9UBQ5 218 aaKnown RBP2.71□□□□□ -1.98
SCFD1-216ENST00000555550 Q9UF83 564 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 KIAA1217Q5T5P2 1943 aa2.71□□□□□ -1.98
SCFD1-216ENST00000555550 SRRM4A7MD48 611 aaKnown RBP2.7□□□□□ -1.98
SCFD1-216ENST00000555550 E7ENQ6 273 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 WDR46O15213 610 aaKnown RBP2.7□□□□□ -1.98
SCFD1-216ENST00000555550 KIAA0513O60268 411 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 RAD51DO75771 328 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 ODC1P11926 461 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 MGMTP16455 207 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 SCN1BQ07699 218 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 EMC2Q15006 297 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 ACKR1Q16570 336 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 C17orf58Q2M2W7 97 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 SNRNP48Q6IEG0 339 aaKnown RBP2.7□□□□□ -1.98
SCFD1-216ENST00000555550 CLEC4GQ6UXB4 293 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 ZNF525Q8N782 197 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 UXS1Q8NBZ7 420 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 SAP25Q8TEE9 199 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 MRPL24Q96A35 216 aaKnown RBP2.7□□□□□ -1.98
SCFD1-216ENST00000555550 ERO1AQ96HE7 468 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 LRRC2Q9BYS8 371 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 AMBNQ9NP70 447 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 SLCO1C1Q9NYB5 712 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 ADAM22Q9P0K1 906 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 RCOR3Q9P2K3 495 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-216ENST00000555550 GPR132Q9UNW8 380 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 RNF24Q9Y225 148 aa2.7□□□□□ -1.98
SCFD1-216ENST00000555550 RNF212BA8MTL3 300 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 H7C0S8 307 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 SAP18O00422 153 aaKnown RBP2.69□□□□□ -1.98
SCFD1-216ENST00000555550 SYT7O43581 403 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 ANXA9O76027 345 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 P4HA1P13674 534 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 FOSL2P15408 326 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 FASP25445 335 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 GDF1P27539 372 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 MDH2P40926 338 aaKnown RBP2.69□□□□□ -1.98
SCFD1-216ENST00000555550 RPL27P61353 136 aaKnown RBP2.69□□□□□ -1.98
SCFD1-216ENST00000555550 TFCP2Q12800 502 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 C14orf28Q4W4Y0 310 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 C2orf83Q53S99 150 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 CAPN13Q6MZZ7 669 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-216ENST00000555550 CGB2Q6NT52 195 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 SIGLEC15Q6ZMC9 328 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 SIX6OS1Q8N1H7 587 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 ARL14Q8N4G2 192 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 OR1K1Q8NGR3 316 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 SPATA18Q8TC71 538 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 PCED1BQ96HM7 432 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 FAM212BQ9NTI7 297 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-216ENST00000555550 TAS2R16Q9NYV7 291 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 OR1A2Q9Y585 309 aa2.69□□□□□ -1.98
SCFD1-216ENST00000555550 CDX4O14627 284 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-216ENST00000555550 IFIT3O14879 490 aaKnown RBP2.68□□□□□ -1.98
SCFD1-216ENST00000555550 SIX3O95343 332 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-216ENST00000555550 PDGFBP01127 241 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-216ENST00000555550 IGHG3P01860 377 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 PGAM2P15259 253 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 MAGEA9P43362 315 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 KCNJ1P48048 391 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 MEOX2P50222 304 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 SLC25A1P53007 311 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 PRKCEQ02156 737 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 GVQW1Q8N7I0 195 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 ZNF491Q8N8L2 437 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 ZNF671Q8TAW3 534 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 VN1R17PQ8TDU5 208 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 AFAP1L1Q8TED9 768 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 FAM162AQ96A26 154 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 RAB40CQ96S21 281 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 RASL10BQ96S79 203 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 IL1RL2Q9HB29 575 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 MRPL17Q9NRX2 175 aaKnown RBP2.68□□□□□ -1.98
SCFD1-216ENST00000555550 SPG21Q9NZD8 308 aa2.68□□□□□ -1.98
SCFD1-216ENST00000555550 MAGEB16A2A368 324 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 CCT8L1PA6NM43 557 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 CHUKO15111 745 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 HDAC3O15379 428 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 TSC22D2O75157 780 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 TBCAO75347 108 aaKnown RBP2.67□□□□□ -1.98
SCFD1-216ENST00000555550 PRKAR2BP31323 418 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 TSPY1Q01534 308 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 PTK6Q13882 451 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 KCTD2Q14681 263 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 SPHARQ15513 63 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 PPP1R3AQ16821 1122 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 ANKRD55Q3KP44 614 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 HERC4Q5GLZ8 1057 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-216ENST00000555550 DCAF12Q5T6F0 453 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 PODNL1Q6PEZ8 512 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 AQP12AQ8IXF9 295 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms