RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 AVPR1BP47901 424 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 MANFP55145 182 aaKnown RBP16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 SNRPD1P62314 119 aaKnown RBP16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 GPR50Q13585 617 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 SYPL1Q16563 259 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 ZNF461Q8TAF7 563 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 ZFPM2Q8WW38 1151 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 SLC6A18Q96N87 628 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 BCL7BQ9BQE9 202 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 SLAMF7Q9NQ25 335 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 LATO43561 262 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 LEFTY1O75610 366 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 C8orf89P0DMQ9 161 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 PSMB5P28074 263 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 KIR2DL3P43628 341 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 GALK2Q01415 458 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 ACSM5Q6NUN0 579 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 GAREM2Q75VX8 874 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 OR52P1PQ8NH57 321 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 TMEM19Q96HH6 336 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 OR2AG1Q9H205 316 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 C1GALT1Q9NS00 363 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 ITGB1BP2Q9UKP3 347 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 NDRG2Q9UN36 371 aaKnown RBP16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 SSR3Q9UNL2 185 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 LAMA1P25391 3075 aa16.24■□□□□ 0.19
PPP4R3A-208ENST00000555462 SPTBN5Q9NRC6 3674 aaKnown RBP16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 KPNA3O00505 521 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SYPP08247 313 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 CSF3P09919 207 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 IL18Q14116 193 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 GPNMBQ14956 572 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 C22orf39Q6P5X5 142 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 RNF180Q86T96 592 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 YIPF7Q8N8F6 280 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SLC38A5Q8WUX1 472 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 TTLL2Q9BWV7 592 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 CHST8Q9H2A9 424 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 REEP4Q9H6H4 257 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SPATA6Q9NWH7 488 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 ERVH48-1M5A8F1 160 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SLC28A2O43868 658 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 HPGDSO60760 199 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 IL1RNP18510 177 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 BUD31P41223 144 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 CRYBB2P43320 205 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SNAPC1Q16533 368 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 ZNF57Q68EA5 555 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 KIAA1161Q6NSJ0 714 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 MED27Q6P2C8 311 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 RFPL4BQ6ZWI9 263 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SLC7A13Q8TCU3 470 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 C16orf78Q8WTQ4 265 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SNAPC3Q92966 411 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 GPA33Q99795 319 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 CNIH4Q9P003 139 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 NTNG1Q9Y2I2 539 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 HSPB11Q9Y547 144 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 CD8B2A6NJW9 211 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 TMEM189-UBE2V1I3L0A0 370 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 GFYI3L273 518 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 CD8BP10966 210 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 CTBP2P56545 445 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 OLR1P78380 273 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 FLYWCH1Q4VC44 716 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SMUG1Q53HV7 270 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 DCST1Q5T197 706 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 IQCHQ86VS3 1027 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 DENND6BQ8NEG7 585 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 PIK3R3Q92569 461 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 MIXL1Q9H2W2 232 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 CRNNQ9UBG3 495 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 ZNF282Q9UDV7 671 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 SNX7Q9UNH6 387 aa16.23■□□□□ 0.19
PPP4R3A-208ENST00000555462 ARID1AO14497 2285 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 HELZP42694 1942 aaKnown RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 HEPACAM2A8MVW5 462 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 ANHXE9PGG2 379 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CASKO14936 926 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 RECKO95980 971 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CHRNB1P11230 501 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CD72P21854 359 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 ATP6V1E1P36543 226 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 GSTM5P46439 218 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 HNMTP50135 292 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 ZNF763Q0D2J5 394 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 GINS1Q14691 196 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 LARS2Q15031 903 aaKnown RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CDK10Q15131 360 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 AMER3Q8N944 861 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 FAM46DQ8NEK8 389 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 KLHL6Q8WZ60 621 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 NELL2Q99435 816 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 UCK2Q9BZX2 261 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 OR2B2Q9GZK3 357 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 MOV10Q9HCE1 1003 aaKnown RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CCDC177Q9NQR7 707 aaPredicted RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 TXNL4BQ9NX01 149 aaKnown RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CMAHPQ9Y471 501 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms