RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 TNFP01375 233 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 ZNF10P21506 573 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 MATN1P21941 496 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SUOXP51687 545 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 HYAL1Q12794 435 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SLC14A1Q13336 389 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 DUSP6Q16828 381 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 KIAA1161Q6NSJ0 714 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 VASH1Q7L8A9 365 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 PEX11GQ96HA9 241 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 MCCC1Q96RQ3 725 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 POLR2J3Q9H1A7 115 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 FAM120CQ9NX05 1096 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 TBC1D29Q9UFV1 150 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 MRPS7Q9Y2R9 242 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 PCDHB3Q9Y5E6 796 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 B3GALT2O43825 422 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 CD22P20273 847 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 RPL3P39023 403 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SERPINB10P48595 397 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 MAZP56270 477 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 RUNX1T1Q06455 604 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 ZNF267Q14586 743 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SHFQ7M4L6 423 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 NRSN1Q8IZ57 195 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 IQCF1Q8N6M8 205 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 OR9A2Q8NGT5 310 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 OR2L2Q8NH16 312 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 OR1E3Q8WZA6 343 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SGCDQ92629 289 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 DPYSL5Q9BPU6 564 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 C6orf106Q9H6K1 298 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SLC25A37Q9NYZ2 338 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 A0A096LPI6 279 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 DLGAP3O95886 979 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 DCNP07585 359 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 CKMT1AP12532 417 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 ALOX12P18054 663 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 PAICSP22234 425 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 HTR1EP28566 365 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 MC3RP41968 323 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 HHEXQ03014 270 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 LTB4RQ15722 352 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 NPTX1Q15818 432 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SYPL1Q16563 259 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 DPY19L1Q2PZI1 675 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 CRB2Q5IJ48 1285 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 SLCO4C1Q6ZQN7 724 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 Q7L0L9 218 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 EPHX4Q8IUS5 362 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 TMEM19Q96HH6 336 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 KLHL31Q9H511 634 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 RETREG1Q9H6L5 497 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 RLIMQ9NVW2 624 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 ACSL5Q9ULC5 683 aa11.64□□□□□ -0.55
ARHGEF40-206ENST00000555232 URADA6NGE7 173 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 GTPBP1O00178 669 aaKnown RBP11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 MYL12BO14950 172 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 LILRB3O75022 631 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 GGT1P19440 569 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 ATP4BP51164 291 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 NKX3-2P78367 333 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 PRR5P85299 388 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 VLDLRP98155 873 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 EXOC3L2Q2M3D2 409 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 ZNF311Q5JNZ3 666 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 EOGTQ5NDL2 527 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 GRHL2Q6ISB3 625 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 HMBOX1Q6NT76 420 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 SYCE2Q6PIF2 218 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 ZCCHC7Q8N3Z6 543 aaKnown RBP11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 OR13H1Q8NG92 308 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 OR5K1Q8NHB7 308 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 PSMA8Q8TAA3 256 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 RAB7BQ96AH8 199 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 MRPL38Q96DV4 380 aaKnown RBP11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 C16orf58Q96GQ5 468 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 DEPDC7Q96QD5 511 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 COPS4Q9BT78 406 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 OR51I1Q9H343 314 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 TCEAL2Q9H3H9 227 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 POLE4Q9NR33 117 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 ANKMY1Q9P2S6 941 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 LOC285556D6RIA3 1793 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 LCMT2O60294 686 aaKnown RBP11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 PRMT3O60678 531 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 HSD17B1P14061 328 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 KRT20P35900 424 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 MAP4K2Q12851 820 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 CLCA4Q14CN2 919 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 C5orf22Q49AR2 442 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 RNASE12Q5GAN4 147 aaKnown RBP11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 ALG1LQ6GMV1 187 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 ERICH5Q6P6B1 374 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 BORAQ6PGQ7 559 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 TSSK4Q6SA08 328 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 HSDL2Q6YN16 418 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 PDZD3Q86UT5 571 aa11.63□□□□□ -0.55
ARHGEF40-206ENST00000555232 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms