RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 OGTO15294 1046 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 PCDH7O60245 1069 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 ECI2O75521 394 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 RHBDL1O75783 438 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 IGHEP01854 428 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 FGF4P08620 206 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 HTR2AP28223 471 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 ALDH1B1P30837 517 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 SRD5A2P31213 254 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 STIP1P31948 543 aaKnown RBP4.7□□□□□ -1.66
VRK1-203ENST00000555067 CA8P35219 290 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 CETN2P41208 172 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 VAMP7P51809 220 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 NUCB2P80303 420 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 DMTNQ08495 405 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 EFTUD2Q15029 972 aaKnown RBP eCLIP4.7□□□□□ -1.667e-8■■□□□ 11.8
VRK1-203ENST00000555067 CCDC57Q2TAC2 916 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 SPDYCQ5MJ68 293 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 RABGAP1LQ5R372 815 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 ZNF772Q68DY9 489 aaPredicted RBP4.7□□□□□ -1.66
VRK1-203ENST00000555067 ASPHD2Q6ICH7 369 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 UGT3A1Q6NUS8 523 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 TTC27Q6P3X3 843 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 PACS1Q6VY07 963 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 KRTAP7-1Q8IUC3 87 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 BHLHE23Q8NDY6 225 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 TRPV3Q8NET8 790 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 OR11H4Q8NGC9 324 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 SLC38A5Q8WUX1 472 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 RLN3Q8WXF3 142 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 OSTF1Q92882 214 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 PIGTQ969N2 578 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 ZNF524Q96C55 264 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 SCRN2Q96FV2 425 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 RAB40CQ96S21 281 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 PLIN2Q99541 437 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 NEURL2Q9BR09 285 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 ALKBH7Q9BT30 221 aaPredicted RBP4.7□□□□□ -1.66
VRK1-203ENST00000555067 ALG12Q9BV10 488 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 ARRDC1-AS1Q9H2J1 176 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 CLSTN2Q9H4D0 955 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 C5orf66Q9H5L9 145 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 COG4Q9H9E3 785 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 FAM114A2Q9NRY5 505 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 ACOXLQ9NUZ1 547 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 RAB20Q9NX57 234 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 GDAP2Q9NXN4 497 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 FOXJ3Q9UPW0 622 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 MRPS33Q9Y291 106 aaKnown RBP4.7□□□□□ -1.66
VRK1-203ENST00000555067 MRPS2Q9Y399 296 aaKnown RBP4.7□□□□□ -1.66
VRK1-203ENST00000555067 AP4B1Q9Y6B7 739 aa4.7□□□□□ -1.66
VRK1-203ENST00000555067 EIF4G1Q04637 1599 aaKnown RBP4.7□□□□□ -1.66
VRK1-203ENST00000555067 CUX2O14529 1486 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 COL2A1P02458 1487 aaPredicted RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 GOLGA6L7A0A1B0GV03 622 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 SERTM2A0A1B0GWG4 89 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 OR5K3A6NET4 321 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 PRR32B1ATL7 298 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 E5RGE8 158 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 BLOC1S5-TXNDC5H3BN57 136 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 GAPDHSO14556 408 aaPredicted RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 DNALI1O14645 258 aaPredicted RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 CTAGE5O15320 804 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 BUB1O43683 1085 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 KIF5CO60282 957 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 CPNE6O95741 557 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 EPOP01588 193 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 UQCRFS1P1P0C7P4 283 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 F3P13726 295 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 CBLP22681 906 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 GJB2P29033 226 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 CHI3L1P36222 383 aaPredicted RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 PTGFRP43088 359 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 NUMBP49757 651 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 RGS4P49798 205 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 ATP5IP56385 69 aaPredicted RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 TRIP10Q15642 601 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 ZNF542PQ5EBM4 170 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 ARMCX4Q5H9R4 360 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 LIPKQ5VXJ0 399 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 CLEC2AQ6UVW9 174 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 LINGO4Q6UY18 593 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 RAD9BQ6WBX8 426 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 CDHR3Q6ZTQ4 885 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 PAQR9Q6ZVX9 377 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 EFL1Q7Z2Z2 1120 aaKnown RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 YRDCQ86U90 279 aaKnown RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 PTOV1Q86YD1 416 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 TMEM139Q8IV31 216 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 PHC2Q8IXK0 858 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 NIPA2Q8N8Q9 360 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 NOA1Q8NC60 698 aaKnown RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 OR10Q1Q8NGQ4 319 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 GOLGA5Q8TBA6 731 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 ATP8B4Q8TF62 1192 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 PHYHIPQ92561 330 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 GLYATL1Q969I3 302 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 TSACCQ96A04 125 aaPredicted RBP4.69□□□□□ -1.66
VRK1-203ENST00000555067 SLC41A3Q96GZ6 507 aa4.69□□□□□ -1.66
VRK1-203ENST00000555067 LRR1Q96L50 414 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms