RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 ZNF791Q3KP31 576 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 DEPDC1Q5TB30 811 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 NDUFAF5Q5TEU4 345 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 C3orf62Q6ZUJ4 267 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 SLC22A16Q86VW1 577 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 LIX1LQ8IVB5 337 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 FAM109AQ8N4B1 249 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 SRFBP1Q8NEF9 429 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 OR7G3Q8NG95 312 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 MRRFQ96E11 262 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 ATOH8Q96SQ7 321 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 NAPGQ99747 312 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 ERP44Q9BS26 406 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 TTYH2Q9BSA4 534 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 SORBS1Q9BX66 1292 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 ROGDIQ9GZN7 287 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 ALG9Q9H6U8 611 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 COPS7BQ9H9Q2 264 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 KCNJ16Q9NPI9 418 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 TUBA8Q9NY65 449 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 GRHL1Q9NZI5 618 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 ATG4BQ9Y4P1 393 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 NF1P21359 2839 aa11.29□□□□□ -0.6
MTHFD1-207ENST00000554677 ACOT7O00154 380 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 SAP18O00422 153 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 AQP7O14520 342 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 EIF3HO15372 352 aaKnown RBP eCLIP11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 KLK8O60259 260 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 SUSD5O60279 629 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 RFPL3SP0C7P2 107 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 SLC35E2BP0CK96 405 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 MTHFD2P13995 350 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 ENDOUP21128 410 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 ACVR2AP27037 513 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 PIGAP37287 484 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 ADH7P40394 386 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 STT3AP46977 705 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 DLX5P56178 289 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 TGM3Q08188 693 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 ASPHQ12797 758 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 SLAMF1Q13291 335 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 SLC10A1Q14973 349 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 HIST2H2ACQ16777 129 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 AP5B1Q2VPB7 878 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 TMEM35AQ53FP2 167 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 PAGE2BQ5JRK9 111 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 HIST2H2AA3Q6FI13 130 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 OR4C11Q6IEV9 310 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 ZNF585AQ6P3V2 769 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 OPN5Q6U736 354 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 GK5Q6ZS86 529 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 ACAD11Q709F0 780 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 LRRC70Q7Z2Q7 622 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 C9orf40Q8IXQ3 194 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 BBOF1Q8ND07 529 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 OR5L2Q8NGL0 311 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 OR5M3Q8NGP4 307 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 NUBPLQ8TB37 319 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 STAG3L4Q8TBR4 150 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 DOK4Q8TEW6 326 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 PPWD1Q96BP3 646 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 SMC6Q96SB8 1091 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 CNPPD1Q9BV87 410 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 OR51B5Q9H339 312 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 SACM1LQ9NTJ5 587 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 WHRNQ9P202 907 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 RNF112Q9ULX5 631 aa11.28□□□□□ -0.6
MTHFD1-207ENST00000554677 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.6
MTHFD1-207ENST00000554677 VPS13CQ709C8 3753 aa11.27□□□□□ -0.6
MTHFD1-207ENST00000554677 A0A0G2JNJ9 132 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 ATP6AP2A0A1C7CYW4 349 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 FAM187AA6NFU0 413 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 FOXO6A8MYZ6 492 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 UBXN8O00124 270 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 BCKDKO14874 412 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 RAD51CO43502 376 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 PRKRAO75569 313 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 ATP6AP2O75787 350 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 PCNAP12004 261 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 CPN2P22792 545 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 PAFAH1B1P43034 410 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 HNRNPH2P55795 449 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 TRADDQ15628 312 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 KBTBD12Q3ZCT8 623 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 GRTP1Q5TC63 336 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 KHDRBS2Q5VWX1 349 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 C18orf63Q68DL7 685 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 MED27Q6P2C8 311 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 FAM47EQ6ZV65 393 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 CHSY3Q70JA7 882 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 CMC1Q7Z7K0 106 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 HUS1BQ8NHY5 278 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 PAQR8Q8TEZ7 354 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 UBTD2Q8WUN7 234 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 CDKL2Q92772 493 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 EXT2Q93063 718 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 UCN3Q969E3 161 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 NXNL1Q96CM4 212 aa11.27□□□□□ -0.61
MTHFD1-207ENST00000554677 CMTM7Q96FZ5 175 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms