RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 DLG1Q12959 904 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 SF3B4Q15427 424 aaKnown RBP eCLIP6.05□□□□□ -1.44
FOXN3-205ENST00000553904 CPSF6Q16630 551 aaKnown RBP eCLIP6.05□□□□□ -1.44
FOXN3-205ENST00000553904 TBCELQ5QJ74 424 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 PRAMEF9Q5VWM5 478 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 HLA-DQA1Q5Y7H0 255 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 ZDHHC24Q6UX98 284 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 GDF7Q7Z4P5 450 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 UBE3DQ7Z6J8 389 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 MILR1Q7Z6M3 343 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 CTAGE6Q86UF2 777 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 LCA5Q86VQ0 697 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF227Q86WZ6 799 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 NUDT13Q86X67 352 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 CTAGE4Q8IX94 777 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 AMER2Q8N7J2 671 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 L3MBTL4Q8NA19 623 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 TMEM52Q8NDY8 209 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 MYRIPQ8NFW9 859 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 OR2M7Q8NG81 312 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 OR4K14Q8NGD5 310 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF592Q92610 1267 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 RND1Q92730 232 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 TP53INP1Q96A56 240 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 ANKRD9Q96BM1 317 aaPredicted RBP6.05□□□□□ -1.44
FOXN3-205ENST00000553904 MTBPQ96DY7 904 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 DTNBP1Q96EV8 351 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 FBXL20Q96IG2 436 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 PHF12Q96QT6 1004 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 SPOCK3Q9BQ16 436 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 MRPL57Q9BQC6 102 aaKnown RBP6.05□□□□□ -1.44
FOXN3-205ENST00000553904 FUT8Q9BYC5 575 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 AICDAQ9GZX7 198 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 DEFB127Q9H1M4 99 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 TSPAN10Q9H1Z9 355 aaPredicted RBP6.05□□□□□ -1.44
FOXN3-205ENST00000553904 DDX31Q9H8H2 851 aaKnown RBP6.05□□□□□ -1.44
FOXN3-205ENST00000553904 IL1RL2Q9HB29 575 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 KCNJ16Q9NPI9 418 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 DMRT3Q9NQL9 472 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 ZDHHC18Q9NUE0 388 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF180Q9UJW8 692 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 ADAM29Q9UKF5 820 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 NFU1Q9UMS0 254 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 SNX6Q9UNH7 406 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 CFL2Q9Y281 166 aa6.05□□□□□ -1.44
FOXN3-205ENST00000553904 FER1L5A0AVI2 2057 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 C2orf92A0A1B0GVN3 265 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 CCDC151A5D8V7 595 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 GOLGA6L10A6NI86 522 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 FIGNL2A6NMB9 653 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 C4orf51C9J302 202 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 POC1B-GALNT4F8VUJ3 575 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 RTCAO00442 366 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 PLPP1O14494 284 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 FANCGO15287 622 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 HCN1O60741 890 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SH3BGRLO75368 114 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 PDE9AO76083 593 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 OR6B1O95007 311 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 GABRA1P14867 456 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 KRT15P19012 456 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ELAVL4P26378 380 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SSTR2P30874 369 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 CHRNB4P30926 498 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SOX3P41225 446 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 MAN2A2P49641 1150 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 TMED10P49755 219 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ST13P50502 369 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 HNRNPFP52597 415 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 NRG3P56975 720 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 GPR85P60893 370 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 IGLV3-21P80748 117 aaPredicted RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 TNFRSF17Q02223 184 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 FOLH1Q04609 750 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ASPHQ12797 758 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 TRADDQ15628 312 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 HYAL4Q2M3T9 481 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SPRED3Q2MJR0 410 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF750Q32MQ0 723 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 GXYLT1Q4G148 440 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 CCNYL2Q5T2Q4 361 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 WLSQ5T9L3 541 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 FRG2Q64ET8 278 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 TMEM198Q66K66 360 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF793Q6ZN11 406 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 RNF111Q6ZNA4 994 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 MDGA2Q7Z553 956 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 GOLGA7Q7Z5G4 137 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 LURAP1LQ8IV03 231 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 HOMEZQ8IX15 550 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 OR4N5Q8IXE1 308 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 IFT20Q8IY31 132 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SRRM1Q8IYB3 904 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 CENPLQ8N0S6 344 aaPredicted RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 FAM109AQ8N4B1 249 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 CEP112Q8N8E3 955 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 PTGR2Q8N8N7 351 aaPredicted RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 KIF18AQ8NI77 898 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF721Q8TF20 911 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 CHTF18Q8WVB6 975 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms