RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 LILRA3Q8N6C8 439 aaPredicted RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 MRPS31Q92665 395 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 PLD4Q96BZ4 506 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 RIPOR3Q96MK2 946 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 CDCA4Q9BXL8 241 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 HNRNPCL2B2RXH8 293 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 IGLV3-27P01718 113 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ENDOUP21128 410 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 PTGER1P34995 402 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 CSNK1DP48730 415 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 SLC11A1P49279 550 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 DCDC1P59894 354 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 CHRNEQ04844 493 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 EFR3AQ14156 821 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 REEP3Q6NUK4 255 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 TAS1R1Q7RTX1 841 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 IQCHQ86VS3 1027 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 DNAJC5GQ8N7S2 189 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 L3MBTL4Q8NA19 623 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 TEX47Q8TBZ9 253 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 UBTD2Q8WUN7 234 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 KAT2AQ92830 837 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 MED30Q96HR3 178 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 MBD1Q9UIS9 605 aaPredicted RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 PLXNA1Q9UIW2 1896 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF780AO75290 641 aaPredicted RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 DHFRP00374 187 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 DDX5P17844 614 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 DGKGP49619 791 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 MTAPQ13126 283 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 SPIN4Q56A73 249 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ARTNQ5T4W7 220 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 LDLRAD1Q5T700 205 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 BCL2L15Q5TBC7 163 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 FAM205BPQ63HN1 556 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ANKRD54Q6NXT1 300 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 CHST9Q7L1S5 443 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 OR2AP1Q8NGE2 309 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 TBC1D20Q96BZ9 403 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ZFP3Q96NJ6 502 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 QRFPRQ96P65 431 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ZSCAN5AQ9BUG6 496 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 TEX12Q9BXU0 123 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 SUV39H2Q9H5I1 410 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 IL20RAQ9UHF4 553 aa11.05□□□□□ -0.64
PPFIA2-227ENST00000552948 ARHGEF33A8MVX0 844 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 H3BNC9 293 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 SSNA1O43805 119 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 RAB36O95755 333 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 IL3P08700 152 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 ETV6P41212 452 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 FGFBP1Q14512 234 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 KLHL12Q53G59 568 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 SLC35F1Q5T1Q4 408 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 USP50Q70EL3 339 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 CFAP206Q8IYR0 622 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 WDR48Q8TAF3 677 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 NEIL3Q8TAT5 605 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 MYLIPQ8WY64 445 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 REPS1Q96D71 796 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 NXF2Q9GZY0 626 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 ASAH2Q9NR71 780 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 EXTL2Q9UBQ6 330 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 BTNL2Q9UIR0 455 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 V9GYH0 126 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 PCP4L1A6NKN8 68 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 WASHC1A8K0Z3 465 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 M0R3H8 397 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 POLR1CO15160 346 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 TSPAN6O43657 245 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 SCN2BO60939 215 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 ERAL1O75616 437 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 URODP06132 367 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 CYP2A6P11509 494 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 SDHBP21912 280 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 PPP2R1BP30154 601 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 PTGS2P35354 604 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 MAPK8P45983 427 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 CTBP2P56545 445 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 PFN3P60673 137 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 RHAGQ02094 409 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 P2RY14Q15391 338 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 ATCAYQ86WG3 371 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 ARMC5Q96C12 935 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 RAD9AQ99638 391 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 HBQ1P09105 142 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 ALPPL2P10696 532 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 CD22P20273 847 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 MAP4K2Q12851 820 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 NUMA1Q14980 2115 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 GDPGP1Q6ZNW5 385 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 SLC38A6Q8IZM9 456 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 MMP21Q8N119 569 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 NATD1Q8N6N6 113 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 NLGN4YQ8NFZ3 816 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 NEIL2Q969S2 332 aa11.04□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF607Q96SK3 696 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms