RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 KIF2BQ8N4N8 673 aa14.39□□□□□ -0.11
PRPF40B-211ENST00000551063 MORN4Q8NDC4 146 aa14.39□□□□□ -0.11
PRPF40B-211ENST00000551063 TCP10LQ8TDR4 215 aa14.39□□□□□ -0.11
PRPF40B-211ENST00000551063 FAM111AQ96PZ2 611 aa14.39□□□□□ -0.11
PRPF40B-211ENST00000551063 HBEGFQ99075 208 aa14.39□□□□□ -0.11
PRPF40B-211ENST00000551063 NPAS2Q99743 824 aa14.39□□□□□ -0.11
PRPF40B-211ENST00000551063 PLA2G3Q9NZ20 509 aa14.39□□□□□ -0.11
PRPF40B-211ENST00000551063 CLCA3PQ9Y6N3 262 aa14.39□□□□□ -0.11
PRPF40B-211ENST00000551063 TRBV11-1A0A0K0K1C0 115 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 CYSRT1A8MQ03 144 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 TYROBPO43914 113 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 SPAG7O75391 227 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 CRCPO75575 148 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 MAPK12P53778 367 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 ID2Q02363 134 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 FOLH1Q04609 750 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 SRSF1Q07955 248 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 FCRLBQ6BAA4 426 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 HOMEZQ8IX15 550 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 ST13P4Q8IZP2 240 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 PTPMT1Q8WUK0 201 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 NCLNQ969V3 563 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 DGAT2Q96PD7 388 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 KCNA7Q96RP8 456 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 GATA5Q9BWX5 397 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 DEFB126Q9BYW3 111 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 ACPTQ9BZG2 426 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 ZNF223Q9UK11 482 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 TIMM22Q9Y584 194 aa14.38□□□□□ -0.11
PRPF40B-211ENST00000551063 GABRR3A8MPY1 467 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 C17orf105B2RV13 164 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 DYRK3O43781 588 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 PRKRAO75569 313 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 GPR75O95800 540 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 GBAP04062 536 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 ALOX15P16050 662 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 TNNI3P19429 210 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 FOXA1P55317 472 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 MLF1P58340 268 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 TRA2BP62995 288 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 PRR30Q53SZ7 412 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 SPIN4Q56A73 249 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 CEP85LQ5SZL2 805 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 NDUFAF5Q5TEU4 345 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 FAM219BQ5XKK7 198 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 LRIG3Q6UXM1 1119 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 OR4N5Q8IXE1 308 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 C1orf52Q8N6N3 182 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 GALNT11Q8NCW6 608 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 CATSPER1Q8NEC5 780 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 OR1N1Q8NGS0 311 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 SUN3Q8TAQ9 357 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 CHTF18Q8WVB6 975 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 SREK1Q8WXA9 508 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 SNRNP40Q96DI7 357 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 RBM18Q96H35 190 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 ART5Q96L15 291 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 ZIM3Q96PE6 472 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 UTP23Q9BRU9 249 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 CDCP1Q9H5V8 836 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 SSU72Q9NP77 194 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 TEX10Q9NXF1 929 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 SLC17A7Q9P2U7 560 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 MCM8Q9UJA3 840 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 PCDHGB6Q9Y5F9 930 aa14.37□□□□□ -0.11
PRPF40B-211ENST00000551063 SCN2AQ99250 2005 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 C1orf226A1L170 272 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 CLEC18AA5D8T8 446 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 FCHO1O14526 889 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 MAN1A2O60476 641 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 NPHS1O60500 1241 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 PRAMEF2O60811 474 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 ZFAND5O76080 213 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 UROSP10746 265 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 CHN1P15882 459 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 ALDH3A1P30838 453 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 GALNSP34059 522 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 TRHRP34981 398 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 SERPINB5P36952 375 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 ACSM2AQ08AH3 577 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 TUBA3CQ13748 450 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 SPRED3Q2MJR0 410 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 TNFAIP8L3Q5GJ75 292 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 ACSM2BQ68CK6 577 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 GALNT18Q6P9A2 607 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 TUBA3EQ6PEY2 450 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 CLEC18BQ6UXF7 455 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 FAM26EQ8N5C1 309 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 CISD2Q8N5K1 135 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 CLEC18CQ8NCF0 446 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 OR8K3Q8NH51 312 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 SLC2A12Q8TD20 617 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 PGM2Q96G03 612 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 BARD1Q99728 777 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 TRIM45Q9H8W5 580 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 AGPAT4Q9NRZ5 378 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 SIRT5Q9NXA8 310 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 COPS7AQ9UBW8 275 aa14.36□□□□□ -0.11
PRPF40B-211ENST00000551063 PCDHA9Q9Y5H5 950 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms