RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 HSPA7P48741 367 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 ATP6V0D1P61421 351 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 KCNJ2P63252 427 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 DR1Q01658 176 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 IRF8Q02556 426 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 ASPHQ12797 758 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 PDIA2Q13087 525 aaKnown RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 TBCCQ15814 346 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 HSPB2Q16082 182 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 TGIF2LYQ8IUE0 185 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 FBXW8Q8N3Y1 598 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 ACOT4Q8N9L9 421 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 FBXO36Q8NEA4 188 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 NRGNQ92686 78 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 RMND5BQ96G75 393 aaPredicted RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 RBM18Q96H35 190 aaKnown RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 PWWP2AQ96N64 755 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 PHACTR1Q9C0D0 580 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 CCM2LQ9NUG4 571 aaPredicted RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 QPCTLQ9NXS2 382 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 CD274Q9NZQ7 290 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 CNIH4Q9P003 139 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 ST6GALNAC2Q9UJ37 374 aa12.53□□□□□ -0.4
TROAP-211ENST00000549891 ZNF469Q96JG9 3925 aaPredicted RBP12.53□□□□□ -0.4
TROAP-211ENST00000549891 ANKHD1Q8IWZ3 2542 aaKnown RBP12.52□□□□□ -0.4
TROAP-211ENST00000549891 ZNF354AO60765 605 aaPredicted RBP12.52□□□□□ -0.41
TROAP-211ENST00000549891 SCELO95171 688 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 ETHE1O95571 254 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 CCDC166P0CW27 439 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 ADH7P40394 386 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 STT3AP46977 705 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 DLX5P56178 289 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 PLIN5Q00G26 463 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 CHIT1Q13231 466 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 ZNF791Q3KP31 576 aaPredicted RBP12.52□□□□□ -0.41
TROAP-211ENST00000549891 ADNP2Q6IQ32 1131 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 ZNF793Q6ZN11 406 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 LIX1LQ8IVB5 337 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 ZZZ3Q8IYH5 903 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 LIX1Q8N485 282 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 PDPRQ8NCN5 879 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 BBOF1Q8ND07 529 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 GOT1L1Q8NHS2 421 aaPredicted RBP12.52□□□□□ -0.41
TROAP-211ENST00000549891 PAQR8Q8TEZ7 354 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 CDKL2Q92772 493 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 TANKQ92844 425 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 ANKRD9Q96BM1 317 aaPredicted RBP12.52□□□□□ -0.41
TROAP-211ENST00000549891 SPACA9Q96E40 222 aaPredicted RBP12.52□□□□□ -0.41
TROAP-211ENST00000549891 SENP5Q96HI0 755 aaPredicted RBP12.52□□□□□ -0.41
TROAP-211ENST00000549891 CENPKQ9BS16 269 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 MS4A8Q9BY19 250 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 CLEC4MQ9H2X3 399 aaPredicted RBP12.52□□□□□ -0.41
TROAP-211ENST00000549891 ZNF703Q9H7S9 590 aaPredicted RBP12.52□□□□□ -0.41
TROAP-211ENST00000549891 ZFP64Q9NPA5 681 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 ACKR4Q9NPB9 350 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 ADGRE2Q9UHX3 823 aa12.52□□□□□ -0.41
TROAP-211ENST00000549891 NIPBLQ6KC79 2804 aaeCLIP12.52□□□□□ -0.41
TROAP-211ENST00000549891 NAV3Q8IVL0 2385 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 SYT5O00445 386 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 DVL2O14641 736 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 ZSCAN12O43309 604 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 FGF17O60258 216 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 CCNT2O60583 730 aaKnown RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 PRAMEF4O60810 478 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 SEC31AO94979 1220 aaKnown RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 WISP3O95389 354 aaPredicted RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 STMN1P16949 149 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 KLK2P20151 261 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 CD22P20273 847 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 DNASE1P24855 282 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 SERPINB3P29508 390 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 TLX1P31314 330 aaPredicted RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 UQCRC1P31930 480 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 PIGAP37287 484 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 CASP2P42575 452 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 IGLV3-21P80748 117 aaPredicted RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 ID2Q02363 134 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 SF3B4Q15427 424 aaKnown RBP eCLIP12.51□□□□□ -0.411e-8■■■■□ 24.3
TROAP-211ENST00000549891 FBXO48Q5FWF7 155 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 PRAMEF9Q5VWM5 478 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 MED27Q6P2C8 311 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 SLC29A4Q7RTT9 530 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 LRRC70Q7Z2Q7 622 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 UBE3DQ7Z6J8 389 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 C9orf40Q8IXQ3 194 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 KLHL7Q8IXQ5 586 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 ULK2Q8IYT8 1036 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 LRRC25Q8N386 305 aaPredicted RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 SPATA6LQ8N4H0 392 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 NEIL3Q8TAT5 605 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 ZNF473Q8WTR7 871 aaKnown RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 ESAMQ96AP7 390 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 CMTM7Q96FZ5 175 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 FBXL20Q96IG2 436 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 GPATCH1Q9BRR8 931 aaKnown RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 PELOQ9BRX2 385 aaKnown RBP12.51□□□□□ -0.41
TROAP-211ENST00000549891 MCMBPQ9BTE3 642 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 CNPPD1Q9BV87 410 aa12.51□□□□□ -0.41
TROAP-211ENST00000549891 RPF2Q9H7B2 306 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms