RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ZNF670-ZNF695F2Z2N8 137 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 RTCAO00442 366 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 PQBP1O60828 265 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 UGT2B17O75795 530 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 C1GALT1C1LP0DN25 315 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 PIPP12273 146 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 ELAVL4P26378 380 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 XKP51811 444 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 LSM11P83369 360 aaKnown RBP eCLIP13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 TCTN3Q6NUS6 607 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 GLYATL1Q969I3 302 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 REPS1Q96D71 796 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 ACAT2Q9BWD1 397 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 MYNNQ9NPC7 610 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 ENOPH1Q9UHY7 261 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 TMCC3Q9ULS5 477 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 STUB1Q9UNE7 303 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 YARS2Q9Y2Z4 477 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 DYRK1BQ9Y463 629 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 PCDHGB2Q9Y5G2 931 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 PLXNA2O75051 1894 aa13.45□□□□□ -0.26
RAPGEF3-218ENST00000548919 FAM172BPA6NC97 362 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 CENPXA8MT69 81 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 HEPACAM2A8MVW5 462 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 C5orf58C9J3I9 102 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 TEX28O15482 410 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 CSF2P04141 144 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 CTSLP07711 333 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 TIMP2P16035 220 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 ZNF30P17039 623 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 ALDH9A1P49189 494 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 PRLHRP49683 370 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 PCDH1Q08174 1060 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 GRIN2CQ14957 1233 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 LARS2Q15031 903 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 ZNF284Q2VY69 593 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 TMEM215Q68D42 235 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 C22orf42Q6IC83 251 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 FAM131AQ6UXB0 335 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 CASP12Q6UXS9 341 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 OLIG3Q7RTU3 272 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 PHC2Q8IXK0 858 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 GALNT12Q8IXK2 581 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 TMEM19Q96HH6 336 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 ZSCAN5AQ9BUG6 496 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC46A2Q9BY10 475 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 NDUFB11Q9NX14 153 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 PAQR5Q9NXK6 330 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 TVP23BQ9NYZ1 205 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 TBC1D14Q9P2M4 693 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 CARD8Q9Y2G2 431 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 CMAHPQ9Y471 501 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 USP34Q70CQ2 3546 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 FOXE1O00358 373 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 SH3BP5O60239 455 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 CYP2A6P11509 494 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 RECQLP46063 649 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 SNRPGP62308 76 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 RUNX1T1Q06455 604 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 HYAL2Q12891 473 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 TARDBPQ13148 414 aaKnown RBP eCLIP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 HNRNPA0Q13151 305 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 FLYWCH1Q4VC44 716 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 MEX3DQ86XN8 651 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 OR9Q1Q8NGQ5 310 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 IL17FQ96PD4 163 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 MND1Q9BWT6 205 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 NLNQ9BYT8 704 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 POLR2J3Q9H1A7 115 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 MVB12BQ9H7P6 319 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 RANGRFQ9HD47 186 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 SPG21Q9NZD8 308 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 SEC14L4Q9UDX3 406 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 PLAGL1Q9UM63 463 aa13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 GOLGA4Q13439 2230 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-218ENST00000548919 HYKKA2RU49 373 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 RFXAPO00287 272 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TLX2O43763 284 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 PRKYO43930 277 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ADAP00813 363 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 MYCP01106 439 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 WEE1P30291 646 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC7A9P82251 487 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TLE2Q04725 743 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 HSPB3Q12988 150 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 DCST1Q5T197 706 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 BRAT1Q6PJG6 821 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 COMTD1Q86VU5 262 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 KLHDC8AQ8IYD2 350 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 NANOGP1Q8N7R0 232 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ASCC1Q8N9N2 400 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 SETD6Q8TBK2 473 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 AP2M1Q96CW1 435 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 DEPDC7Q96QD5 511 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TMEM246Q9BRR3 403 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 MIXL1Q9H2W2 232 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 NUFIP1Q9UHK0 495 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 SSR3Q9UNL2 185 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 GRIP1Q9Y3R0 1128 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms