RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 LAPTM5Q13571 262 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 XKR6Q5GH73 641 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 PAGE2BQ5JRK9 111 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 HP1BP3Q5SSJ5 553 aaPredicted RBP7.83□□□□□ -1.16
TROAP-208ENST00000548817 RIPPLY2Q5TAB7 128 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 HEPHL1Q6MZM0 1159 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 SLCO4C1Q6ZQN7 724 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 TRILQ7L0X0 811 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 WDR53Q7Z5U6 358 aaPredicted RBP7.83□□□□□ -1.16
TROAP-208ENST00000548817 YTHDF3Q7Z739 585 aaKnown RBP7.83□□□□□ -1.16
TROAP-208ENST00000548817 KIF18BQ86Y91 864 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 LIX1LQ8IVB5 337 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 LRRC8AQ8IWT6 810 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 LIX1Q8N485 282 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 FAM109AQ8N4B1 249 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 TMEM251Q8N6I4 163 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 GOLM1Q8NBJ4 401 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 OR8K3Q8NH51 312 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 ACTRT1Q8TDG2 376 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 LRRC39Q96DD0 335 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 RASL10BQ96S79 203 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 KRT12Q99456 494 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 ZDHHC11Q9H8X9 412 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 DEPPQ9NTK1 212 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 DNAJC11Q9NVH1 559 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.83□□□□□ -1.16
TROAP-208ENST00000548817 NSMCE4AQ9NXX6 385 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 WWOXQ9NZC7 414 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 GPRC5BQ9NZH0 403 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 SLC17A6Q9P2U8 582 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 VTI1BQ9UEU0 232 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 CHMP2BQ9UQN3 213 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 MPDZO75970 2070 aa7.83□□□□□ -1.16
TROAP-208ENST00000548817 EML6Q6ZMW3 1958 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 TRGV5A0A0B4J1U4 118 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 MYOCOSA0A1B0GUC4 107 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 CTAGE15A4D2H0 777 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 PINLYPA6NC86 204 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 TRIM64A6NGJ6 449 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 TUBAL3A6NHL2 446 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 TRIM64BA6NI03 449 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 NCF1BA6NI72 391 aaPredicted RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 CLCA1A8K7I4 914 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 NCF1CA8MVU1 366 aaPredicted RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 C4orf51C9J302 202 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 AQP7O14520 342 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 PRKNO60260 465 aaPredicted RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 SUSD5O60279 629 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 HCN1O60741 890 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 STK16O75716 305 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 GLSO94925 669 aaPredicted RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 IGHG3P01860 377 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 NCF1P14598 390 aaPredicted RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 ZNF37AP17032 561 aaPredicted RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 TACR1P25103 407 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 CERS1P27544 350 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 GDF5P43026 501 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 MAGEA5P43359 124 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 KCNC1P48547 511 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 HNRNPFP52597 415 aaKnown RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 HK2P52789 917 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 LIM2P55344 173 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 KCNJ2P63252 427 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 RNF4P78317 190 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 SORDQ00796 357 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 DMTNQ08495 405 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 BIKQ13323 160 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 MORF4L2Q15014 288 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 SF3B4Q15427 424 aaKnown RBP eCLIP7.82□□□□□ -1.16
TROAP-208ENST00000548817 TSNQ15631 228 aaKnown RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 PPP1R3AQ16821 1122 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 AP5B1Q2VPB7 878 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 MSS51Q4VC12 460 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 C1orf185Q5T7R7 199 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 SLC22A10Q63ZE4 541 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 ABHD17CQ6PCB6 329 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 SYDE1Q6ZW31 735 aaPredicted RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 CTAGE6Q86UF2 777 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 GPSM1Q86YR5 675 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 IGDCC3Q8IVU1 814 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 TMEM52Q8NDY8 209 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 SLC22A8Q8TCC7 542 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 PTPMT1Q8WUK0 201 aaPredicted RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 SMPDL3BQ92485 455 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 UBE2E3Q969T4 207 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 RHBDF1Q96CC6 855 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 PTCD3Q96EY7 689 aaKnown RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 TSPAN17Q96FV3 270 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 RBM18Q96H35 190 aaKnown RBP7.82□□□□□ -1.16
TROAP-208ENST00000548817 SCYL1Q96KG9 808 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 ART5Q96L15 291 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 QRFPRQ96P65 431 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 KCNC2Q96PR1 638 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 OSBPL9Q96SU4 736 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 SH3GL2Q99962 352 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 CENPKQ9BS16 269 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 TBCDQ9BTW9 1192 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 EFCAB11Q9BUY7 163 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 EHD1Q9H4M9 534 aa7.82□□□□□ -1.16
TROAP-208ENST00000548817 LYRM4Q9HD34 91 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms