RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 GOLM1Q8NBJ4 401 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 RELL2Q8NC24 303 aaPredicted RBP11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 TNIP2Q8NFZ5 429 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 NINJ1Q92982 152 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 EXT2Q93063 718 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 ANKRD9Q96BM1 317 aaPredicted RBP11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 LRRC39Q96DD0 335 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SENP5Q96HI0 755 aaPredicted RBP11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SGCZQ96LD1 299 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 KRT12Q99456 494 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SMR3AQ99954 134 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 TMEM79Q9BSE2 394 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SORBS1Q9BX66 1292 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 CXXC4Q9H2H0 198 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 EPB41L4BQ9H329 900 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 NT5DC2Q9H857 520 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 DMRT3Q9NQL9 472 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 DNAJC11Q9NVH1 559 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 COPS7AQ9UBW8 275 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 EXPH5Q8NEV8 1989 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 MED12LQ86YW9 2145 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 C15orf38-AP3S2A0A0A6YYH1 394 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 WASHC1A8K0Z3 465 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 EFCAB8A8MWE9 144 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 CCDC188H7C350 402 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 TP73O15350 636 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 FGF17O60258 216 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 PRKRAO75569 313 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 TRAPPC6AO75865 159 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 DRD2P14416 443 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 GABRA1P14867 456 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 CD22P20273 847 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 ATP5A1P25705 553 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 MSH2P43246 934 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 SLC12A2P55011 1212 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 ADAM8P78325 824 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 MRPS25P82663 173 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 TGM3Q08188 693 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 MGAT5Q09328 741 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 PDIA2Q13087 525 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 SERTAD2Q14140 314 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 FASTKD3Q14CZ7 662 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 TGFBIQ15582 683 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 HIST2H2ACQ16777 129 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 AP5B1Q2VPB7 878 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 ADPRMQ3LIE5 342 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 RIPPLY2Q5TAB7 128 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 HIST2H2AA3Q6FI13 130 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 TMEM64Q6YI46 380 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 ADAMTSL2Q86TH1 951 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 LIX1Q8N485 282 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 NAXEQ8NCW5 288 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 FBXO36Q8NEA4 188 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 LINC01560Q8TB33 94 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 ANP32BQ92688 251 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 DGAT2Q96PD7 388 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 GAL3ST4Q96RP7 486 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 CAPS2Q9BXY5 557 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 CD274Q9NZQ7 290 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 PYCARDQ9ULZ3 195 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 MTO1Q9Y2Z2 717 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 SNX24Q9Y343 169 aa11.01□□□□□ -0.65
TRAFD1-205ENST00000548277 FAM221AA4D161 298 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 A6NNC1 897 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 HSPB2A8KAH6 182 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 SYT5O00445 386 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 PHGDHO43175 533 aaKnown RBP11□□□□□ -0.65
TRAFD1-205ENST00000548277 HCN1O60741 890 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 ACSL3O95573 720 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 CCDC166P0CW27 439 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 COX7A2P14406 83 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 TACR1P25103 407 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 GDF1P27539 372 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 GMPRP36959 345 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 RPL21P46778 160 aaKnown RBP11□□□□□ -0.65
TRAFD1-205ENST00000548277 KCNC1P48547 511 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 IRF8Q02556 426 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 CHIT1Q13231 466 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 SLAMF1Q13291 335 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 DDX39BQ13838 428 aaKnown RBP11□□□□□ -0.65
TRAFD1-205ENST00000548277 FRG1Q14331 258 aaKnown RBP11□□□□□ -0.65
TRAFD1-205ENST00000548277 ZNF267Q14586 743 aaPredicted RBP11□□□□□ -0.65
TRAFD1-205ENST00000548277 TOMM20Q15388 145 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 HSPB2Q16082 182 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 MPEG1Q2M385 716 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 HYAL4Q2M3T9 481 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 ZNF791Q3KP31 576 aaPredicted RBP11□□□□□ -0.65
TRAFD1-205ENST00000548277 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 GPSM1Q86YR5 675 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 C9orf40Q8IXQ3 194 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 ULK2Q8IYT8 1036 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 OR10G3Q8NGC4 313 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 OR8K3Q8NH51 312 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 SLC22A8Q8TCC7 542 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 ANKRD7Q92527 254 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 PTCD3Q96EY7 689 aaKnown RBP11□□□□□ -0.65
TRAFD1-205ENST00000548277 RBM18Q96H35 190 aaKnown RBP11□□□□□ -0.65
TRAFD1-205ENST00000548277 VPS39Q96JC1 886 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 KCNC2Q96PR1 638 aa11□□□□□ -0.65
TRAFD1-205ENST00000548277 PHACTR1Q9C0D0 580 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms