RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	ZNF578	Q96N58	590 aa	Predicted RBP	11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	CCDC106	Q9BWC9	280 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	YIPF2	Q9BWQ6	316 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	WDR41	Q9HAD4	459 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	MIEF1	Q9NQG6	463 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	C14orf105	Q9NVL8	296 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	TMEM45A	Q9NWC5	275 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	TAS2R7	Q9NYW3	318 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	ARMCX1	Q9P291	453 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	MRPS33	Q9Y291	106 aa	Known RBP	11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	AK5	Q9Y6K8	562 aa		11.21	□□□□□ -0.61
PFKM-208	ENST00000547148	SDK2	Q58EX2	2172 aa		11.21	□□□□□ -0.62
PFKM-208	ENST00000547148	DSP	P15924	2871 aa	Known RBP	11.21	□□□□□ -0.62
PFKM-208	ENST00000547148	IGKV3D-11	A0A0A0MRZ8	115 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	FAM234B	A2RU67	622 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	OR2W5	A6NFC9	320 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	FGF17	O60258	216 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	KLF7	O75840	302 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	DCTN3	O75935	186 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	RAB40AL	P0C0E4	278 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	LAMP1	P11279	417 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	COX7A2	P14406	83 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	PIK3R1	P27986	724 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	ADSL	P30566	484 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	RPL3	P39023	403 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	HSD17B7	P56937	341 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	BTG2	P78543	158 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	IGLV3-21	P80748	117 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	FOLH1	Q04609	750 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	OCA2	Q04671	838 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	KLF10	Q13118	480 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	CEBPE	Q15744	281 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	MPEG1	Q2M385	716 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	DPY19L1	Q2PZI1	675 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	TBC1D25	Q3MII6	688 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	FAM174B	Q3ZCQ3	159 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	MINDY4	Q4G0A6	757 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	SPANXN4	Q5MJ08	99 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	CPTP	Q5TA50	214 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	MLIP	Q5VWP3	458 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	BLOC1S3	Q6QNY0	202 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	QSOX2	Q6ZRP7	698 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	LAPTM4B	Q86VI4	370 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	TREML1	Q86YW5	311 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	ENDOV	Q8N8Q3	282 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	OR8J2	Q8NGG1	315 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	TANK	Q92844	425 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	NKD1	Q969G9	470 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	EXOSC8	Q96B26	276 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	MIEF2	Q96C03	454 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	PPCDC	Q96CD2	204 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	KLHL29	Q96CT2	875 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	COQ8B	Q96D53	544 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	CNRIP1	Q96F85	164 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	LRRC37B	Q96QE4	947 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	ZBTB18	Q99592	522 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	VN1R1	Q9GZP7	353 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	SLAMF7	Q9NQ25	335 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	SLC52A3	Q9NQ40	469 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	PRTFDC1	Q9NRG1	225 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	MRGBP	Q9NV56	204 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	CROT	Q9UKG9	612 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	NXT1	Q9UKK6	140 aa	Known RBP	11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	UTS2R	Q9UKP6	389 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	MAPRE3	Q9UPY8	281 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	MMACHC	Q9Y4U1	282 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	CAPN7	Q9Y6W3	813 aa		11.2	□□□□□ -0.62
PFKM-208	ENST00000547148	NBEA	Q8NFP9	2946 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148		A0A1W2PS29	197 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	CAPN14	A8MX76	684 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	C21orf140	B9A014	251 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	CTNS	O60931	367 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	LDB3	O75112	727 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	GPR75	O95800	540 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	LIPC	P11150	499 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	TCN2	P20062	427 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	CAPN3	P20807	821 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	MAOA	P21397	527 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	F8A1	P23610	371 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	KIR3DL1	P43629	444 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	POLR2J	P52435	117 aa	Known RBP	11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	WNT3	P56703	355 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	PCBP4	P57723	403 aa	Known RBP	11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	PHC1	P78364	1004 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	ID2	Q02363	134 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	DUSP2	Q05923	314 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	ACTN3	Q08043	901 aa	Predicted RBP	11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	SLC13A2	Q13183	592 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	DNASE1L3	Q13609	305 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	AGK	Q53H12	422 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	FAM69B	Q5VUD6	431 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	FAM91A1	Q658Y4	838 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	FAM180B	Q6P0A1	224 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	GK5	Q6ZS86	529 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	SHISA6	Q6ZSJ9	500 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	OR4N5	Q8IXE1	308 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	PRSS58	Q8IYP2	241 aa		11.19	□□□□□ -0.62
PFKM-208	ENST00000547148	FITM2	Q8N6M3	262 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms