RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 GMEB2Q9UKD1 530 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 MOKQ9UQ07 419 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 RNF24Q9Y225 148 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 TMED7Q9Y3B3 224 aa2.76□□□□□ -1.97
CCDC38-204ENST00000546816 GTPBP10A4D1E9 387 aaKnown RBP2.75□□□□□ -1.97
CCDC38-204ENST00000546816 TMCO5BA8MYB1 307 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 TNFSF11O14788 317 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 TBCAO75347 108 aaKnown RBP2.75□□□□□ -1.97
CCDC38-204ENST00000546816 CLN5O75503 358 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 GRAP2O75791 330 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 LYPD3O95274 346 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 LYNP07948 512 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 IFNAR1P17181 557 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 GDF1P27539 372 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 GJB2P29033 226 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ERVPABLB-1P60509 514 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 CXCL6P80162 114 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 SCN1BQ07699 218 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ISXQ2M1V0 245 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 WDR25Q64LD2 544 aaPredicted RBP2.75□□□□□ -1.97
CCDC38-204ENST00000546816 PM20D1Q6GTS8 502 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ZNF530Q6P9A1 599 aaPredicted RBP2.75□□□□□ -1.97
CCDC38-204ENST00000546816 PET117Q6UWS5 81 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ZNF730Q6ZMV8 503 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ZNF444Q8N0Y2 327 aaPredicted RBP2.75□□□□□ -1.97
CCDC38-204ENST00000546816 RNF149Q8NC42 400 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 TBCKQ8TEA7 893 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ATG101Q9BSB4 218 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ZNF665Q9H7R5 613 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 AMBNQ9NP70 447 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 MRPL17Q9NRX2 175 aaKnown RBP2.75□□□□□ -1.97
CCDC38-204ENST00000546816 GPR173Q9NS66 373 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ETV7Q9Y603 341 aa2.75□□□□□ -1.97
CCDC38-204ENST00000546816 ARHGEF37A1IGU5 675 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 CCT8L1PA6NM43 557 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 CCSO14618 274 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 NPBWR1P48145 328 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 SLC25A1P53007 311 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 RIPK4P57078 832 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 FOLH1Q04609 750 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 SLC17A1Q14916 467 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 LYPLAL1Q5VWZ2 237 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 IGFL2Q6UWQ7 119 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 AFAP1L1Q8TED9 768 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 EXOC4Q96A65 974 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 RBM18Q96H35 190 aaKnown RBP2.74□□□□□ -1.97
CCDC38-204ENST00000546816 CCT8L2Q96SF2 557 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 VPS18Q9P253 973 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 ZNF319Q9P2F9 582 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 KIAA1217Q5T5P2 1943 aa2.74□□□□□ -1.97
CCDC38-204ENST00000546816 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 YDJCA8MPS7 323 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 KBTBD13C9JR72 458 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 RAD51DO75771 328 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 OR6A2O95222 327 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 HOXC4P09017 264 aaPredicted RBP2.73□□□□□ -1.97
CCDC38-204ENST00000546816 GPX3P22352 226 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 FNTAP49354 379 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 KIAA0040Q15053 153 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 ANKRD55Q3KP44 614 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 C14orf28Q4W4Y0 310 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 AGAP6Q5VW22 663 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 ZNF544Q6NX49 715 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 CASC4Q6P4E1 433 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 TRAT1Q6PIZ9 186 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 LINC01006Q8NI28 216 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 ZNF564Q8TBZ8 553 aaPredicted RBP2.73□□□□□ -1.97
CCDC38-204ENST00000546816 DEPDC1BQ8WUY9 529 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 BSCL2Q96G97 398 aaPredicted RBP2.73□□□□□ -1.97
CCDC38-204ENST00000546816 C17orf62Q9BQA9 187 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 TTYH2Q9BSA4 534 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 MLPHQ9BV36 600 aaPredicted RBP2.73□□□□□ -1.97
CCDC38-204ENST00000546816 GIMAP2Q9UG22 337 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 EXOC6BQ9Y2D4 811 aa2.73□□□□□ -1.97
CCDC38-204ENST00000546816 CFAP65Q6ZU64 1925 aaKnown RBP2.73□□□□□ -1.97
CCDC38-204ENST00000546816 IGHV3-35A0A0C4DH35 117 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 OOEPA6NGQ2 149 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 M0R296 226 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 DUSP11O75319 330 aaKnown RBP2.72□□□□□ -1.97
CCDC38-204ENST00000546816 CSO75390 466 aaKnown RBP2.72□□□□□ -1.97
CCDC38-204ENST00000546816 CSDE1O75534 798 aaKnown RBP2.72□□□□□ -1.97
CCDC38-204ENST00000546816 RLN1P04808 185 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 PGAM2P15259 253 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 PRKCIP41743 596 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 RPL27P61353 136 aaKnown RBP2.72□□□□□ -1.97
CCDC38-204ENST00000546816 MFGE8Q08431 387 aaPredicted RBP2.72□□□□□ -1.97
CCDC38-204ENST00000546816 ABRAXAS1Q6UWZ7 409 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 ADGRD2Q7Z7M1 963 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 SIAH3Q8IW03 269 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 FBXO16Q8IX29 292 aaPredicted RBP2.72□□□□□ -1.97
CCDC38-204ENST00000546816 OR1K1Q8NGR3 316 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 INTS14Q96SY0 518 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 LSG1Q9H089 658 aaKnown RBP2.72□□□□□ -1.97
CCDC38-204ENST00000546816 ABCC13Q9NSE7 274 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 MLXQ9UH92 298 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 LEF1Q9UJU2 399 aaPredicted RBP2.72□□□□□ -1.97
CCDC38-204ENST00000546816 CDH7Q9ULB5 785 aa2.72□□□□□ -1.97
CCDC38-204ENST00000546816 TRAV34A0A0B4J273 112 aa2.71□□□□□ -1.98
CCDC38-204ENST00000546816 SDR42E2A6NKP2 422 aa2.71□□□□□ -1.98
CCDC38-204ENST00000546816 RNF212BA8MTL3 300 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 343.9 ms