RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SLC2A6Q9UGQ3 507 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 EVLQ9UI08 416 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 GTF2F2P13984 249 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 EVI2BP34910 448 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 RRAS2P62070 204 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 FLI1Q01543 452 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 VGLL4Q14135 290 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 CLEC12AQ5QGZ9 265 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 KDELC1Q6UW63 502 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 LARP4Q71RC2 724 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 PIM3Q86V86 326 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF584Q8IVC4 421 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 YIPF7Q8N8F6 280 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 EMC7Q9NPA0 242 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 FAM155AB1AL88 458 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 UBXN7O94888 489 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 CORO1AP31146 461 aaKnown RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 IGFALSP35858 605 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 OR7D4Q8NG98 312 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 IMP4Q96G21 291 aaKnown RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 KCNA7Q96RP8 456 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 BRINP2Q9C0B6 783 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 IL37Q9NZH6 218 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 CD300AQ9UGN4 299 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 TTC24A2A3L6 582 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 SMCO3A2RU48 225 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ANKRD66B4E2M5 251 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 F5H5P2 479 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 SLC16A6O15403 523 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TREHO43280 583 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TOXO94900 526 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 MPC1LP0DKB6 136 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF30P17039 623 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ART1P52961 327 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 BTG1P62324 171 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 RAB40BQ12829 278 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 CPZQ66K79 652 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 USP50Q70EL3 339 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 NUP54Q7Z3B4 507 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TPRA1Q86W33 373 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 LRR1Q96L50 414 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 HS6ST2Q96MM7 605 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ARHGAP39Q9C0H5 1083 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 DPEP3Q9H4B8 488 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 NSUN3Q9H649 340 aaKnown RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 GPR83Q9NYM4 423 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ARVCFO00192 962 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 CACNB4O00305 520 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 PPM1BO75688 479 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 S1PR4O95977 384 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 NT5EP21589 574 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 GCAP28676 217 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 FRKP42685 505 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TPMTP51580 245 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 NCBP2P52298 156 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 MICAQ29983 383 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 SYPL2Q5VXT5 272 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ADAMTS14Q8WXS8 1223 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 COPS5Q92905 334 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TESCQ96BS2 214 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 FCRL1Q96LA6 429 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 C5orf34Q96MH7 638 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 CRTAC1Q9NQ79 661 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM248Q9NWD8 314 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 MN1Q10571 1320 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 A0A0D9SG52 128 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ZCWPW2A0A1B0GU75 182 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF705EA8MWA4 302 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ACOT7O00154 380 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 SOX14O95416 240 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 CPNE6O95741 557 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 CKMT1AP12532 417 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF20P17024 532 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ATP5A1P25705 553 aaKnown RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 PCBP2Q15366 365 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 PTCHD3Q3KNS1 767 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 RFPL4BQ6ZWI9 263 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 GALNTL5Q7Z4T8 443 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM151AQ8N4L1 468 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 NEK7Q8TDX7 302 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 LRRC15Q8TF66 581 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 CDCA5Q96FF9 252 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 IL12RB2Q99665 862 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 RBCK1Q9BYM8 510 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 MFFQ9GZY8 342 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ABT1Q9ULW3 272 aaKnown RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 HEBP2Q9Y5Z4 205 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 OR51F1A6NGY5 319 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 SGCEO43556 437 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 LALBAP00709 142 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 DEFA6Q01524 100 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TAP2Q03519 686 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 DUSP4Q13115 394 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 GSG1LQ6UXU4 331 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 RAB11FIP2Q7L804 512 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 GPR149Q86SP6 731 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 IQCHQ86VS3 1027 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 PTRH1Q86Y79 214 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms