RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 C9orf43Q8TAL5 461 aaPredicted RBP15.02■□□□□ -0
LDLR-204ENST00000545707 EXOSC8Q96B26 276 aaKnown RBP15.02■□□□□ -0
LDLR-204ENST00000545707 PDXPQ96GD0 296 aa15.02■□□□□ -0
LDLR-204ENST00000545707 NEDD4LQ96PU5 975 aa15.02■□□□□ -0
LDLR-204ENST00000545707 TAPBPLQ9BX59 468 aa15.02■□□□□ -0
LDLR-204ENST00000545707 ZDHHC5Q9C0B5 715 aa15.02■□□□□ -0
LDLR-204ENST00000545707 HOXD1Q9GZZ0 328 aa15.02■□□□□ -0
LDLR-204ENST00000545707 MVB12BQ9H7P6 319 aa15.02■□□□□ -0
LDLR-204ENST00000545707 SLC25A19Q9HC21 320 aa15.02■□□□□ -0
LDLR-204ENST00000545707 CTPS2Q9NRF8 586 aa15.02■□□□□ -0
LDLR-204ENST00000545707 CUEDC1Q9NWM3 386 aaPredicted RBP15.02■□□□□ -0
LDLR-204ENST00000545707 CNOT2Q9NZN8 540 aaKnown RBP15.02■□□□□ -0
LDLR-204ENST00000545707 MUTYHQ9UIF7 546 aa15.02■□□□□ -0
LDLR-204ENST00000545707 TMCC3Q9ULS5 477 aa15.02■□□□□ -0
LDLR-204ENST00000545707 PNMA8CA0A1B0GUJ8 204 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 SH3D21A4FU49 640 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 A8MVJ9 347 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 RFXAPO00287 272 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 LRRTM2O43300 516 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 MFN2O95140 757 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 APOL3O95236 402 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 ELAVL4P26378 380 aaKnown RBP15.02□□□□□ -0.01
LDLR-204ENST00000545707 PSMB5P28074 263 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 DGKGP49619 791 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 PIN1Q13526 163 aaPredicted RBP15.02□□□□□ -0.01
LDLR-204ENST00000545707 TCEAL5Q5H9L2 206 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 PRAMEF14Q5SWL7 426 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 PRAMEF13Q5VWM6 474 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 NXNL2Q5VZ03 156 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 CCDC149Q6ZUS6 474 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 GPR65Q8IYL9 337 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 ANKRD53Q8N9V6 530 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 GPR151Q8TDV0 419 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 SLC6A18Q96N87 628 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 SLC30A2Q9BRI3 323 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 ZDHHC4Q9NPG8 344 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 NFKBIL1Q9UBC1 381 aaPredicted RBP15.02□□□□□ -0.01
LDLR-204ENST00000545707 KCND3Q9UK17 655 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 CFL2Q9Y281 166 aa15.02□□□□□ -0.01
LDLR-204ENST00000545707 DSPPQ9NZW4 1301 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 SMIM30A4D0T7 59 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 H3BQ06 376 aaPredicted RBP15.01□□□□□ -0.01
LDLR-204ENST00000545707 STATHP02808 62 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 SRPRAP08240 638 aaKnown RBP15.01□□□□□ -0.01
LDLR-204ENST00000545707 OSMP13725 252 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 ITGB8P26012 769 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 BMPR1AP36894 532 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 RPL3P39023 403 aaKnown RBP15.01□□□□□ -0.01
LDLR-204ENST00000545707 MAPK12P53778 367 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 SYPL1Q16563 259 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 SPDYE7PQ495Y7 208 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 DCST1Q5T197 706 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 C6orf120Q7Z4R8 191 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 NRARPQ7Z6K4 114 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 C12orf40Q86WS4 652 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 COQ10AQ96MF6 247 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 TRNT1Q96Q11 434 aaKnown RBP15.01□□□□□ -0.01
LDLR-204ENST00000545707 TAC3Q9UHF0 121 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 MKLN1Q9UL63 735 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 TBC1D24Q9ULP9 559 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 ANTXRLA6NF34 631 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 PDZK1P1A8MUH7 402 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 ANHXE9PGG2 379 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 PPM1DO15297 605 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 DYRK3O43781 588 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 HBQ1P09105 142 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 XKP51811 444 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 ERVFC1P60507 584 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 IFITM2Q01629 132 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 TARDBPQ13148 414 aaKnown RBP eCLIP15.01□□□□□ -0.01
LDLR-204ENST00000545707 COL9A2Q14055 689 aaPredicted RBP15.01□□□□□ -0.01
LDLR-204ENST00000545707 SPHARQ15513 63 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 ZNF697Q5TEC3 545 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 LIPKQ5VXJ0 399 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 AMER3Q8N944 861 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 OR5D16Q8NGK9 328 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 SLC7A13Q8TCU3 470 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 TMEM203Q969S6 136 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 TM4SF18Q96CE8 201 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 CTRCQ99895 268 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 ZNF717Q9BY31 904 aaPredicted RBP15.01□□□□□ -0.01
LDLR-204ENST00000545707 TVP23BQ9NYZ1 205 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 SPATA7Q9P0W8 599 aa15.01□□□□□ -0.01
LDLR-204ENST00000545707 LSM2Q9Y333 95 aaKnown RBP15.01□□□□□ -0.01
LDLR-204ENST00000545707 KIAA1671Q9BY89 1806 aa15□□□□□ -0.01
LDLR-204ENST00000545707 PRAMEF27A3QJZ7 478 aa15□□□□□ -0.01
LDLR-204ENST00000545707 A6NL46 340 aa15□□□□□ -0.01
LDLR-204ENST00000545707 HEPACAM2A8MVW5 462 aa15□□□□□ -0.01
LDLR-204ENST00000545707 M0R3H8 397 aa15□□□□□ -0.01
LDLR-204ENST00000545707 HMGN4O00479 90 aa15□□□□□ -0.01
LDLR-204ENST00000545707 SCG5P05408 212 aa15□□□□□ -0.01
LDLR-204ENST00000545707 RHOP08100 348 aa15□□□□□ -0.01
LDLR-204ENST00000545707 CSF2RAP15509 400 aa15□□□□□ -0.01
LDLR-204ENST00000545707 COPZ1P61923 177 aa15□□□□□ -0.01
LDLR-204ENST00000545707 WDR5P61964 334 aaKnown RBP15□□□□□ -0.01
LDLR-204ENST00000545707 BCL2A1Q16548 175 aa15□□□□□ -0.01
LDLR-204ENST00000545707 LRRC26Q2I0M4 334 aa15□□□□□ -0.01
LDLR-204ENST00000545707 TIMM50Q3ZCQ8 353 aa15□□□□□ -0.01
LDLR-204ENST00000545707 ANKRD33Q7Z3H0 272 aa15□□□□□ -0.01
LDLR-204ENST00000545707 C11orf74Q86VG3 221 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms