RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ANKRD7Q92527 254 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 ZNF592Q92610 1267 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 PIGTQ969N2 578 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 ANKRD9Q96BM1 317 aaPredicted RBP13.51□□□□□ -0.25
RTN3-214ENST00000545432 SPACA9Q96E40 222 aaPredicted RBP13.51□□□□□ -0.25
RTN3-214ENST00000545432 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 TSNARE1Q96NA8 513 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 SERPINB12Q96P63 405 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 YIPF4Q9BSR8 244 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 TRIM5Q9C035 493 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 CALHM2Q9HA72 323 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 PRDM7Q9NQW5 492 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 FETUBQ9UGM5 382 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 IKZF3Q9UKT9 509 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 DYRK1BQ9Y463 629 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 C17orf105B2RV13 164 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 INAFM1C9JVW0 142 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 HPNP05981 417 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 FBXO45P0C2W1 286 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 MTTPP55157 894 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 CDKL1Q00532 357 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 ASPHQ12797 758 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 TMIGD1Q6UXZ0 262 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 SYDE1Q6ZW31 735 aaPredicted RBP13.5□□□□□ -0.25
RTN3-214ENST00000545432 P3H2Q8IVL5 708 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 C9orf40Q8IXQ3 194 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 RNF214Q8ND24 703 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 MAIP1Q8WWC4 291 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 WDYHV1Q96HA8 205 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 SENP5Q96HI0 755 aaPredicted RBP13.5□□□□□ -0.25
RTN3-214ENST00000545432 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 LYRM4Q9HD34 91 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 IARS2Q9NSE4 1012 aaKnown RBP13.5□□□□□ -0.25
RTN3-214ENST00000545432 NINQ8N4C6 2090 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 KIAA1549Q9HCM3 1950 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 NCKAP5O14513 1909 aa13.5□□□□□ -0.25
RTN3-214ENST00000545432 A0A0G2JN53 185 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 SMPD2O60906 423 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 GUCA1CO95843 209 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 CCDC175P0C221 793 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 TRPC1P48995 793 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 CDK9P50750 372 aaKnown RBP13.49□□□□□ -0.25
RTN3-214ENST00000545432 KCNJ2P63252 427 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 STX4Q12846 297 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 BIKQ13323 160 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 NTRK2Q16620 822 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 FNDC7Q5VTL7 733 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 ADGRE4PQ86SQ3 457 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 PPP1R14CQ8TAE6 165 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 SLC22A8Q8TCC7 542 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 Q96MF0 132 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 UCN2Q96RP3 112 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 REXO4Q9GZR2 422 aaKnown RBP13.49□□□□□ -0.25
RTN3-214ENST00000545432 HOMER3Q9NSC5 361 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 TRPS1Q9UHF7 1281 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 NPFFR2Q9Y5X5 522 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 FREM3P0C091 2139 aa13.49□□□□□ -0.25
RTN3-214ENST00000545432 SONP18583 2426 aaKnown RBP13.48□□□□□ -0.25
RTN3-214ENST00000545432 MYOCOSA0A1B0GUC4 107 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 CRLF1O75462 422 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 SCELO95171 688 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 GNAZP19086 355 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 TNNI3P19429 210 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 SAT1P21673 171 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 CERS1P27544 350 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 HPDP32754 393 aaPredicted RBP13.48□□□□□ -0.25
RTN3-214ENST00000545432 SLC6A12P48065 614 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 PLA2G16P53816 162 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 GPS1Q13098 491 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 KCTD19Q17RG1 926 aaPredicted RBP13.48□□□□□ -0.25
RTN3-214ENST00000545432 TBCELQ5QJ74 424 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 PRAMEF20Q5VT98 475 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 UBE3DQ7Z6J8 389 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 LIX1Q8N485 282 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 LRRN4CLQ8ND94 238 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 OR10G3Q8NGC4 313 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 ZPLD1Q8TCW7 415 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 IGFBPL1Q8WX77 278 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 EHD1Q9H4M9 534 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 COPS7AQ9UBW8 275 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 ZNF490Q9ULM2 529 aaPredicted RBP13.48□□□□□ -0.25
RTN3-214ENST00000545432 DOCK7Q96N67 2140 aa13.48□□□□□ -0.25
RTN3-214ENST00000545432 C15orf38-AP3S2A0A0A6YYH1 394 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 SH3D21A4FU49 640 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 CES2O00748 559 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 PRAMEF4O60810 478 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 LDB3O75112 727 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 H2AFYO75367 372 aaKnown RBP13.47□□□□□ -0.25
RTN3-214ENST00000545432 FGGP02679 453 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 PAX1P15863 534 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 SERPINB3P29508 390 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 STT3AP46977 705 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 HNMTP50135 292 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 AGFG1P52594 562 aaKnown RBP13.47□□□□□ -0.25
RTN3-214ENST00000545432 PPP2R2BQ00005 443 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 TRIP13Q15645 432 aaPredicted RBP13.47□□□□□ -0.25
RTN3-214ENST00000545432 PRAMEF9Q5VWM5 478 aa13.47□□□□□ -0.25
RTN3-214ENST00000545432 YTHDF3Q7Z739 585 aaKnown RBP13.47□□□□□ -0.25
RTN3-214ENST00000545432 NAT8LQ8N9F0 302 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms